myRT

myRT report for GCA_002222945.1_ASM222294v1

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Seq: NIHZ01000093.1 Escherichia coli strain FC11893 Scaffold9, whole genome shotgun sequence (184914 bp)
Overview 1 RT 1: 1-3451 bp Neighborhood of RT #1 [1, 3456] Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 1-648 bp Ori: OXJ51830.1 Feature: domain Description: Peptidase_S74 Location: 274-421 bp Feature: domain Description: Peptidase_S74 Location: 274-421 bp Feature: gene Location: 771-986 bp Feature: gene Location: 1086-2456 bp Ori: OXJ51831.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1314-1920 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 31 4-1 920 bp Feature: gene Location: 2434-2985 bp Ori: OXJ51832.1 Feature: domain Description: SLATT_5 Location: 2440-2956 bp Feature: domain Description: SLATT_5 Location: 2440-2956 bp Feature: gene Location: 3208-3456 bp Ori: OXJ51833.1 Feature: domain Description: PRK10597 Location: 3211-3451 bp Feature: domain Description: PRK1 0597 Location: 321 1 -3451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: NIHZ01000082.1 Escherichia coli strain FC11893 Scaffold8, whole genome shotgun sequence (185318 bp)
Overview 1 RT 1: 50559-54439 bp Neighborhood of RT #1 [50559, 54444] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 50559-51014 bp Ori: OXJ52952.1 Feature: domain Description: dut Location: 50562-51009 bp Feature: domain Description: dut Location: 50562 -51009 bp Feature: gene Location: 51121-51717 bp Ori: OXJ52828.1 Feature: domain Description: slmA Location: 51127-51703 bp Feature: domain Description: slmA Location: 5112 7-51703 bp Feature: gene Location: 51763-52722 bp Ori: OXJ52829.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51898-52447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51898-52 447 bp Feature: gene Location: 53020-53661 bp Ori: OXJ52830.1 Feature: domain Description: pyrE Location: 53023-53656 bp Feature: domain Description: pyrE Location: 5302 3-53656 bp Feature: gene Location: 53728-54444 bp Ori: OXJ52831.1 Feature: domain Description: rph Location: 53731-54439 bp Feature: domain Description: rph Location: 53731-54439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)