myRT

myRT report for GCA_002223045.1_ASM222304v1

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Seq: NKFO01000004.1 Burkholderia sp. HI4860 NODE_51_length_26496_cov_46.0258, whole genome shotgun sequence (1766099 bp)
Overview 1 RT 1: 1108934-1112246 bp Neighborhood of RT #1 [1108934, 1112269] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 1108934-1109662 bp Feature: gene Location: 1109689-1110084 bp Feature: gene Location: 1110095-1111090 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1110188-1110875 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 1 01 88-1 1 1 0875 bp Feature: gene Location: 1111434-1111790 bp Feature: domain Description: Avd_like Location: 1111461-1111767 bp Feature: domain Description: Avd_like Location: 1 1 1 1 461 -1 1 1 1 767 bp Feature: gene Location: 1111805-1112269 bp Feature: domain Description: DUF1566 Location: 1112066-1112246 bp Feature: domain Description: DUF1 566 Location: 1 1 1 2066-1 1 1 2246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: NKFO01000015.1 Burkholderia sp. HI4860 NODE_53_length_23392_cov_49.5711, whole genome shotgun sequence (825445 bp)
Overview 1 RT 1: 819466-824349 bp Neighborhood of RT #1 [819466, 824612] YbjD YbjD UvrD RVT-Retrons Feature: gene Location: 819466-821436 bp Feature: domain Description: YbjD Location: 819469-819673 bp Feature: domain Description: YbjD Location: 819469-819673 bp Feature: domain Description: YbjD Location: 820324-820906 bp Feature: domain Description: YbjD Location: 82 032 4-82 0906 bp Feature: gene Location: 821438-823336 bp Feature: domain Description: UvrD Location: 821540-823268 bp Feature: domain Description: UvrD Location: 82 1540-82 32 68 bp Feature: gene Location: 823410-824612 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 823716-824349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82 3716-82 4349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), UvrD (COG0210), RVT-Retrons

Seq: NKFO01000021.1 Burkholderia sp. HI4860 NODE_30_length_94628_cov_47.5723, whole genome shotgun sequence (449560 bp)
Overview 1 RT 1: 398845-404165 bp Neighborhood of RT #1 [398845, 404165] MFS_MucK Histone_HNS RVT-Retrons FIN Feature: gene Location: 398845-400092 bp Feature: domain Description: MFS_MucK Location: 398935-400069 bp Feature: domain Description: MFS_MucK Location: 3 9893 5-400069 bp Feature: gene Location: 400392-400721 bp Feature: domain Description: Histone_HNS Location: 400413-400650 bp Feature: domain Description: Histone_HNS Location: 400413 -400650 bp Feature: gene Location: 401036-402385 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401501-402137 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401501-40213 7 bp Feature: gene Location: 402651-403222 bp Feature: domain Description: FIN Location: 402828-403053 bp Feature: domain Description: FIN Location: 402828-403 053 bp Feature: gene Location: 403893-404165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389)