myRT

myRT report for GCA_002223085.1_ASM222308v1

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Seq: NKFM01000132.1 Burkholderia sp. HI2714 NODE_130_length_1844_cov_137.197, whole genome shotgun sequence (1844 bp)
Overview 1 RT 1: 3-1595 bp Neighborhood of RT #1 [3, 1753] RVT-GII GIIM Feature: gene Location: 3-332 bp Feature: gene Location: 383-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 719-1334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 9-1 334 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1 391 -1 595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NKFM01000032.1 Burkholderia sp. HI2714 NODE_17_length_171640_cov_38.5257, whole genome shotgun sequence (171640 bp)
Overview 1 RT 1: 67136-72955 bp Neighborhood of RT #1 [67136, 72957] PhyH RVT-GII GIIM MetK PRK06946 Feature: gene Location: 67136-67909 bp Feature: domain Description: PhyH Location: 67190-67823 bp Feature: domain Description: PhyH Location: 67190-6782 3 bp Feature: gene Location: 68262-68603 bp Feature: gene Location: 68762-70162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69092-69710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69092 -69710 bp Feature: domain Description: GIIM Note: maturase Location: 69767-69989 bp Feature: domain Description: GIIM Note: maturase Location: 69767-69989 bp Feature: gene Location: 70620-71807 bp Feature: domain Description: MetK Location: 70629-71778 bp Feature: domain Description: MetK Location: 7062 9-71778 bp Feature: gene Location: 72073-72957 bp Feature: domain Description: PRK06946 Location: 72082-72955 bp Feature: domain Description: PRK06946 Location: 72 082 -72 955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhyH (pfam05721), RVT-GII, GIIM (pfam08388), MetK (COG0192), PRK06946 (lipid A biosynthesis lauroyl acyltransferase; Provisional)

Seq: NKFM01000062.1 Burkholderia sp. HI2714 NODE_4_length_425394_cov_45.8079, whole genome shotgun sequence (425394 bp)
Overview 1 RT 1: 109293-112999 bp Neighborhood of RT #1 [109293, 113070] FIN RVT-Retrons Histone_HNS Feature: gene Location: 109293-109565 bp Feature: gene Location: 110226-110798 bp Feature: domain Description: FIN Location: 110403-110760 bp Feature: domain Description: FIN Location: 110403 -110760 bp Feature: gene Location: 111064-112413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 111529-112165 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 111529-112165 bp Feature: gene Location: 112386-112590 bp Feature: gene Location: 112741-113070 bp Feature: domain Description: Histone_HNS Location: 112762-112999 bp Feature: domain Description: Histone_HNS Location: 112762-112999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)