myRT

myRT report for GCA_002223135.1_ASM222313v1

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Seq: NKFH01000004.1 Burkholderia sp. AU33423 NODE_9_length_290042_cov_43.706, whole genome shotgun sequence (2082349 bp)
Overview 1 RT 1: 704844-710243 bp 2 RT 2: 864027-868991 bp Neighborhood of RT #1 [704844, 710245] HpnK HpnL RVT-GII GIIM SmpA_OmlA SmpA_OmlA PRK15135 Neighborhood of RT #2 [864027, 868991] GstA RVT-GII GIIM MFS_ProP Feature: gene Location: 704844-705728 bp Feature: domain Description: HpnK Location: 704868-705666 bp Feature: domain Description: HpnK Location: 704868-705666 bp Feature: gene Location: 705725-706768 bp Feature: domain Description: HpnL Location: 705731-706667 bp Feature: domain Description: HpnL Location: 705731 -706667 bp Feature: gene Location: 707210-708601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707540-708158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707540-7081 58 bp Feature: domain Description: GIIM Note: maturase Location: 708206-708425 bp Feature: domain Description: GIIM Note: maturase Location: 708206-708425 bp Feature: gene Location: 708727-709284 bp Feature: domain Description: SmpA_OmlA Location: 708871-708955 bp Feature: domain Description: SmpA_OmlA Location: 708871 -708955 bp Feature: domain Description: SmpA_OmlA Location: 709054-709129 bp Feature: domain Description: SmpA_OmlA Location: 709054-7091 29 bp Feature: gene Location: 709556-710245 bp Feature: domain Description: PRK15135 Location: 709565-710243 bp Feature: domain Description: PRK1 51 35 Location: 709565-71 0243 bp Feature: gene Location: 864027-864656 bp Feature: domain Description: GstA Location: 864030-864642 bp Feature: domain Description: GstA Location: 864030-864642 bp Feature: gene Location: 864842-865036 bp Feature: gene Location: 865542-866933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 865872-866490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 865872-866490 bp Feature: domain Description: GIIM Note: maturase Location: 866538-866760 bp Feature: domain Description: GIIM Note: maturase Location: 866538-866760 bp Feature: gene Location: 867016-868503 bp Feature: domain Description: MFS_ProP Location: 867142-868378 bp Feature: domain Description: MFS_ProP Location: 8671 42-868378 bp Feature: gene Location: 868630-868991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HpnK (TIGR03473), HpnL (TIGR03476), RVT-GII, GIIM (pfam08388), SmpA_OmlA (pfam04355), PRK15135 (histidine ABC transporter permease HisQ), GstA (COG0625), MFS_ProP (cd17366)

Seq: NKFH01000005.1 Burkholderia sp. AU33423 NODE_18_length_156589_cov_42.1346, whole genome shotgun sequence (1110904 bp)
Overview 1 RT 1: 974526-980336 bp Neighborhood of RT #1 [974526, 980338] PhyH RVT-GII GIIM MetK PRK06946 Feature: gene Location: 974526-975299 bp Feature: domain Description: PhyH Location: 974580-975213 bp Feature: domain Description: PhyH Location: 974580-9752 13 bp Feature: gene Location: 975652-975993 bp Feature: gene Location: 976153-977544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976483-977101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976483-977101 bp Feature: domain Description: GIIM Note: maturase Location: 977149-977368 bp Feature: domain Description: GIIM Note: maturase Location: 977149-977368 bp Feature: gene Location: 978001-979188 bp Feature: domain Description: MetK Location: 978010-979159 bp Feature: domain Description: MetK Location: 978010-979159 bp Feature: gene Location: 979454-980338 bp Feature: domain Description: PRK06946 Location: 979463-980336 bp Feature: domain Description: PRK06946 Location: 979463-980336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhyH (pfam05721), RVT-GII, GIIM (pfam08388), MetK (COG0192), PRK06946 (lipid A biosynthesis lauroyl acyltransferase; Provisional)

Seq: NKFH01000009.1 Burkholderia sp. AU33423 NODE_41_length_42720_cov_48.9084, whole genome shotgun sequence (523465 bp)
Overview 1 RT 1: 368899-372892 bp Neighborhood of RT #1 [368899, 372954] Histone_HNS RVT-Retrons FIN EamA EamA Feature: gene Location: 368899-369228 bp Feature: domain Description: Histone_HNS Location: 368920-369157 bp Feature: domain Description: Histone_HNS Location: 3 68920-3 69157 bp Feature: gene Location: 369379-369583 bp Feature: gene Location: 369556-370905 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 370021-370657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 70021-3 70657 bp Feature: gene Location: 371171-371743 bp Feature: domain Description: FIN Location: 371348-371705 bp Feature: domain Description: FIN Location: 3 713 48-3 71705 bp Feature: gene Location: 371935-372954 bp Feature: domain Description: EamA Location: 372037-372448 bp Feature: domain Description: EamA Location: 3 7203 7-3 72448 bp Feature: domain Description: EamA Location: 372490-372892 bp Feature: domain Description: EamA Location: 3 72490-3 72892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), EamA (pfam00892)