myRT

myRT report for GCA_002223255.1_ASM222325v1

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Seq: NKFB01000004.1 Burkholderia sp. AU17457 NODE_14_length_167770_cov_35.5063, whole genome shotgun sequence (1046633 bp)
Overview 1 RT 1: 269149-275696 bp Neighborhood of RT #1 [269149, 275713] AlpA RVT-UG16 PRK01229 PinE Feature: gene Location: 269149-269673 bp Feature: gene Location: 269670-269861 bp Ori: OXI43452.1 Feature: domain Description: AlpA Location: 269682-269850 bp Feature: domain Description: AlpA Location: 269682-269850 bp Feature: gene Location: 271683-273164 bp Ori: OXI42778.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 272043-272451 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 272043-272451 bp Feature: gene Location: 273789-274739 bp Ori: OXI42779.1 Feature: domain Description: PRK01229 Location: 274383-274683 bp Feature: domain Description: PRK01 229 Location: 274383-274683 bp Feature: gene Location: 275138-275713 bp Ori: OXI42780.1 Feature: domain Description: PinE Location: 275147-275696 bp Feature: domain Description: PinE Location: 2751 47-275696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), RVT-UG16, PRK01229 (N-glycosylase/DNA lyase; Provisional), PinE (COG1961)

Seq: NKFB01000008.1 Burkholderia sp. AU17457 NODE_16_length_142931_cov_40.4792, whole genome shotgun sequence (1185844 bp)
Overview 1 RT 1: 1099194-1103799 bp Neighborhood of RT #1 [1099194, 1103825] Histone_HNS RVT-Retrons his_ut_repres HutH Feature: gene Location: 1099194-1099523 bp Ori: OXI38188.1 Feature: domain Description: Histone_HNS Location: 1099215-1099452 bp Feature: domain Description: Histone_HNS Location: 10992 15-1099452 bp Feature: gene Location: 1099670-1099875 bp Feature: gene Location: 1099848-1101197 bp Ori: OXI38189.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1100313-1100949 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1100313-1100949 bp Feature: gene Location: 1101526-1102281 bp Ori: OXI38190.1 Gene: hutC Feature: domain Description: his_ut_repres Location: 1101604-1102276 bp Feature: domain Description: his_ut_repres Location: 1101604-1102 2 76 bp Feature: gene Location: 1102332-1103825 bp Ori: OXI38191.1 Feature: domain Description: HutH Location: 1102341-1103799 bp Feature: domain Description: HutH Location: 1102 341-1103799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, his_ut_repres (TIGR02018), HutH (COG2986)