myRT

myRT report for GCA_002223275.1_ASM222327v1

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Seq: NKFA01000008.1 Burkholderia sp. AU17325 NODE_9_length_248820_cov_31.8005, whole genome shotgun sequence (915327 bp)
Overview 1 RT 1: 885692-891092 bp Neighborhood of RT #1 [885692, 891092] Dcm RVT-DGRs Avd_like Feature: gene Location: 885692-886999 bp Feature: gene Location: 887065-888885 bp Feature: domain Description: Dcm Location: 887116-888838 bp Feature: domain Description: Dcm Location: 8871 1 6-888838 bp Feature: gene Location: 888882-889874 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 888957-889644 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 888957-889644 bp Feature: gene Location: 890224-890613 bp Feature: domain Description: Avd_like Location: 890251-890557 bp Feature: domain Description: Avd_like Location: 890251 -890557 bp Feature: gene Location: 890628-891092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-DGRs, Avd_like (cd16376)

Seq: NKFA01000029.1 Burkholderia sp. AU17325 NODE_73_length_20172_cov_39.0774, whole genome shotgun sequence (20172 bp)
Overview 1 RT 1: 8971-12328 bp Neighborhood of RT #1 [8971, 12507] Histone_HNS RVT-GII COG4544 Feature: gene Location: 8971-9267 bp Feature: domain Description: Histone_HNS Location: 8989-9247 bp Feature: domain Description: Histone_HNS Location: 8989-92 47 bp Feature: gene Location: 9679-10530 bp Feature: gene Location: 10698-11303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11025-11304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102 5-11304 bp Feature: gene Location: 11384-11668 bp Feature: gene Location: 11791-12507 bp Feature: domain Description: COG4544 Location: 11878-12328 bp Feature: domain Description: COG4544 Location: 11878-12 32 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG4544 (Uncharacterized conserved protein ), Histone_HNS (pfam00816)

Seq: NKFA01000038.1 Burkholderia sp. AU17325 NODE_27_length_125369_cov_35.1842, whole genome shotgun sequence (125369 bp)
Overview 1 RT 1: 103481-107260 bp Neighborhood of RT #1 [103481, 107556] Histone_HNS RVT-Retrons FIN M14_ASTE_ASPA-like Feature: gene Location: 103481-103810 bp Feature: domain Description: Histone_HNS Location: 103502-103739 bp Feature: domain Description: Histone_HNS Location: 103 502-103 73 9 bp Feature: gene Location: 103961-104165 bp Feature: gene Location: 104138-105487 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104603-105239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104603 -10523 9 bp Feature: gene Location: 105755-106327 bp Feature: domain Description: FIN Location: 105932-106289 bp Feature: domain Description: FIN Location: 10593 2-106289 bp Feature: gene Location: 106573-107556 bp Feature: domain Description: M14_ASTE_ASPA-like Location: 106639-107260 bp Feature: domain Description: M14_ASTE_ASPA-like Location: 10663 9-107260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), M14_ASTE_ASPA-like (cd06910)

Seq: NKFA01000086.1 Burkholderia sp. AU17325 NODE_120_length_885_cov_77.6741, whole genome shotgun sequence (885 bp)
Overview 1 RT 1: 29-884 bp Neighborhood of RT #1 [29, 885] RVT-GII Feature: gene Location: 29-345 bp Feature: gene Location: 401-885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 734-884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 734 -884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NKFA01000083.1 Burkholderia sp. AU17325 NODE_117_length_978_cov_83.2855, whole genome shotgun sequence (978 bp)
Overview 1 RT 1: 89-809 bp Neighborhood of RT #1 [89, 967] RVT-GII GIIM Feature: gene Location: 89-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-5 48 bp Feature: domain Description: GIIM Note: maturase Location: 608-809 bp Feature: domain Description: GIIM Note: maturase Location: 608-809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)