myRT

myRT report for GCA_002223365.1_ASM222336v1

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Seq: NKFK01000006.1 Burkholderia sp. AU6039 NODE_26_length_66173_cov_45.4583, whole genome shotgun sequence (405192 bp)
Overview 1 RT 1: 63996-69043 bp Neighborhood of RT #1 [63996, 69045] PRK00943 phn_DUF6 RVT-GII gram_neg_porins Feature: gene Location: 63996-65060 bp Feature: domain Description: PRK00943 Location: 64029-65052 bp Feature: domain Description: PRK00943 Location: 64029-65052 bp Feature: gene Location: 65176-66012 bp Feature: domain Description: phn_DUF6 Location: 65197-66001 bp Feature: domain Description: phn_DUF6 Location: 651 97-66001 bp Feature: gene Location: 66122-67600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66533-67220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66533-67220 bp Feature: gene Location: 67604-67929 bp Feature: gene Location: 67957-69045 bp Feature: domain Description: gram_neg_porins Location: 68020-69043 bp Feature: domain Description: gram_neg_porins Location: 68020-69043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00943 (selenide, water dikinase SelD), phn_DUF6 (TIGR03340), RVT-GII, gram_neg_porins (cd00342)

Seq: NKFK01000003.1 Burkholderia sp. AU6039 NODE_8_length_443050_cov_42.7452, whole genome shotgun sequence (2107646 bp)
Overview 1 RT 1: 1376317-1381665 bp Neighborhood of RT #1 [1376317, 1381667] DUF4034 DUF4034 TPR SEL1 PRK11752 RVT-GII gram_neg_porins Feature: gene Location: 1376317-1377447 bp Feature: domain Description: DUF4034 Location: 1376410-1376791 bp Feature: domain Description: DUF4034 Location: 1376410-1376791 bp Feature: domain Description: DUF4034 Location: 1376860-1376950 bp Feature: domain Description: DUF4034 Location: 1376860-1376950 bp Feature: domain Description: TPR Location: 1377028-1377286 bp Feature: domain Description: TPR Location: 137702 8-13772 86 bp Feature: domain Description: SEL1 Location: 1377310-1377406 bp Feature: domain Description: SEL1 Location: 1377310-1377406 bp Feature: gene Location: 1377748-1378452 bp Feature: domain Description: PRK11752 Location: 1377805-1378438 bp Feature: domain Description: PRK11752 Location: 1377805-1378438 bp Feature: gene Location: 1378708-1380186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1379119-1379806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1379119-1379806 bp Feature: gene Location: 1380190-1380515 bp Feature: gene Location: 1380543-1381667 bp Feature: domain Description: gram_neg_porins Location: 1380609-1381665 bp Feature: domain Description: gram_neg_porins Location: 1380609-1381665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4034 (pfam13226), TPR (smart00028), SEL1 (smart00671), PRK11752 (putative S-transferase; Provisional), RVT-GII, gram_neg_porins (cd00342)

Seq: NKFK01000018.1 Burkholderia sp. AU6039 NODE_45_length_1916_cov_90.2745, whole genome shotgun sequence (1916 bp)
Overview 1 RT 1: 34-1461 bp Neighborhood of RT #1 [34, 1841] RVT-GII Feature: gene Location: 34-359 bp Feature: gene Location: 363-1841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NKFK01000007.1 Burkholderia sp. AU6039 NODE_16_length_214237_cov_41.8, whole genome shotgun sequence (836308 bp)
Overview 1 RT 1: 684495-688274 bp Neighborhood of RT #1 [684495, 688274] Histone_HNS RVT-Retrons FIN Feature: gene Location: 684495-684824 bp Feature: domain Description: Histone_HNS Location: 684516-684753 bp Feature: domain Description: Histone_HNS Location: 684 516-684 753 bp Feature: gene Location: 684975-685179 bp Feature: gene Location: 685152-686501 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 685617-686253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 685617-686253 bp Feature: gene Location: 686767-687339 bp Feature: domain Description: FIN Location: 686944-687304 bp Feature: domain Description: FIN Location: 68694 4 -687304 bp Feature: gene Location: 688002-688274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389)