myRT

myRT report for GCA_002223715.1_ASM222371v1

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Seq: NIIP01000099.1 Escherichia coli strain FC10246 Scaffold53, whole genome shotgun sequence (20639 bp)
Overview 1 RT 1: 13922-17375 bp Neighborhood of RT #1 [13922, 17413] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 13922-14353 bp Feature: domain Description: PRK10276 Location: 13973-14336 bp Feature: domain Description: PRK1 0276 Location: 1 3973-1 4336 bp Feature: gene Location: 14511-14762 bp Feature: gene Location: 14762-16246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15164-15854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 64-1 5854 bp Feature: gene Location: 16398-17095 bp Feature: domain Description: Zn_Tnp_IS1 Location: 16404-16506 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1 6404-1 6506 bp Feature: domain Description: HTH_Tnp_IS1 Location: 16527-16659 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1 6527-1 6659 bp Feature: gene Location: 17105-17413 bp Feature: domain Description: Rep_3 Location: 17111-17375 bp Feature: domain Description: Rep_3 Location: 1 71 1 1 -1 7375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)

Seq: NIIP01000075.1 Escherichia coli strain FC10246 Scaffold31, whole genome shotgun sequence (60958 bp)
Overview 1 RT 1: 44679-49785 bp Neighborhood of RT #1 [44679, 49785] P Q RVT-Retrons Feature: gene Location: 44679-46445 bp Feature: domain Description: P Location: 44706-46440 bp Feature: domain Description: P Location: 44706-46440 bp Feature: gene Location: 46445-47473 bp Feature: domain Description: Q Location: 46448-47468 bp Feature: domain Description: Q Location: 46448-47468 bp Feature: gene Location: 47489-48463 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47651-48203 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47651-482 03 bp Feature: gene Location: 48613-49518 bp Feature: gene Location: 49549-49785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons