myRT

myRT report for GCA_002223865.1_ASM222386v1

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Seq: NIRY01000017.1 Escherichia coli strain CoR-29 Scaffold17, whole genome shotgun sequence (87200 bp)
Overview 1 RT 1: 22414-28445 bp Neighborhood of RT #1 [22414, 28582] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22414-22554 bp Ori: OXK86806.1 Feature: domain Description: SfsB Location: 22423-22495 bp Feature: domain Description: SfsB Location: 22423-22495 bp Feature: gene Location: 22551-23021 bp Feature: gene Location: 23368-26577 bp Ori: OXK86808.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23896-24385 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23896-24385 bp Feature: domain Description: nitrilase Location: 25891-26488 bp Feature: domain Description: nitrilase Location: 25891 -26488 bp Feature: gene Location: 26872-27675 bp Ori: OXK86809.1 Feature: domain Description: AbiEi_3_N Location: 26905-27166 bp Feature: domain Description: AbiEi_3_N Location: 26905-271 66 bp Feature: domain Description: AbiEi_3 Location: 27178-27634 bp Feature: domain Description: AbiEi_3 Location: 271 78-27634 bp Feature: gene Location: 27662-28582 bp Ori: OXK86810.1 Feature: domain Description: AbiEii Location: 27704-28445 bp Feature: domain Description: AbiEii Location: 27704-28445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: NIRY01000051.1 Escherichia coli strain CoR-29 Scaffold51, whole genome shotgun sequence (16409 bp)
Overview 1 RT 1: 2316-6316 bp Neighborhood of RT #1 [2316, 6324] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2316-3677 bp Ori: OXK81342.1 Feature: domain Description: DcuC Location: 2319-3651 bp Feature: domain Description: DcuC Location: 2 319-3651 bp Feature: gene Location: 3730-3957 bp Feature: gene Location: 4323-4885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4629-4731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462 9-4731 bp Feature: gene Location: 4933-5135 bp Feature: gene Location: 5293-6324 bp Ori: OXK81343.1 Feature: domain Description: Asparaginase_2 Location: 5383-6316 bp Feature: domain Description: Asparaginase_2 Location: 5383-6316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)

Seq: NIRY01000061.1 Escherichia coli strain CoR-29 Scaffold61, whole genome shotgun sequence (9931 bp)
Overview 1 RT 1: 7116-9931 bp Neighborhood of RT #1 [7116, 9931] YesM RVT-GII GIIM Feature: gene Location: 7116-8345 bp Ori: OXK80849.1 Feature: domain Description: YesM Location: 7596-8337 bp Feature: domain Description: YesM Location: 7596-83 3 7 bp Feature: gene Location: 8418-8606 bp Feature: gene Location: 8961-9482 bp Ori: OXK80851.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8967-9249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8967-9249 bp Feature: domain Description: GIIM Note: maturase Location: 9297-9477 bp Feature: domain Description: GIIM Note: maturase Location: 9297-9477 bp Feature: gene Location: 9510-9931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)