myRT

myRT report for GCA_002224705.1_ASM222470v1

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Seq: JSXL01000014.1 Escherichia coli strain NA057 contig0014, whole genome shotgun sequence (2362 bp)
Overview 1 RT 1: 159-2362 bp Neighborhood of RT #1 [159, 2362] RVT-GII GIIM Feature: gene Location: 159-1667 bp Ori: OXL62467.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 7-1 1 49 bp Feature: domain Description: GIIM Note: maturase Location: 1224-1422 bp Feature: domain Description: GIIM Note: maturase Location: 1 224-1 422 bp Feature: gene Location: 1636-2061 bp Feature: gene Location: 2274-2362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JSXL01000040.1 Escherichia coli strain NA057 contig0040, whole genome shotgun sequence (166011 bp)
Overview 1 RT 1: 22407-28438 bp Neighborhood of RT #1 [22407, 28575] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22407-22547 bp Ori: OXL60073.1 Feature: domain Description: SfsB Location: 22416-22488 bp Feature: domain Description: SfsB Location: 2 2 416-2 2 488 bp Feature: gene Location: 22544-23014 bp Feature: gene Location: 23361-26570 bp Ori: OXL60075.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23889-24378 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 3889-2 4378 bp Feature: domain Description: nitrilase Location: 25884-26481 bp Feature: domain Description: nitrilase Location: 2 5884-2 6481 bp Feature: gene Location: 26886-27668 bp Ori: OXL60076.1 Feature: domain Description: AbiEi_3_N Location: 26898-27159 bp Feature: domain Description: AbiEi_3_N Location: 2 6898-2 7159 bp Feature: domain Description: AbiEi_3 Location: 27171-27627 bp Feature: domain Description: AbiEi_3 Location: 2 7171-2 762 7 bp Feature: gene Location: 27655-28575 bp Ori: OXL60077.1 Feature: domain Description: AbiEii Location: 27697-28438 bp Feature: domain Description: AbiEii Location: 2 7697-2 8438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)