myRT

myRT report for GCA_002225655.1_ASM222565v1

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Seq: NLGC01000055.1 Escherichia coli strain MOD1-EC5739 MOD1-EC5739_55_length_17041_cov_17.7622, whole genome shotgun sequence (17040 bp)
Overview 1 RT 1: 2270-9764 bp Neighborhood of RT #1 [2270, 9766] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C ESPR O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT autotrans_barl Feature: gene Location: 2270-3709 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2408-2633 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2408-2633 bp Feature: domain Description: zf-IS66 Location: 2654-2786 bp Feature: domain Description: zf-IS66 Location: 2654-2786 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2831-3668 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2831 -3668 bp Feature: gene Location: 3917-4078 bp Feature: gene Location: 4171-5403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4372-5026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4372-5026 bp Feature: domain Description: GIIM Note: maturase Location: 5104-5326 bp Feature: domain Description: GIIM Note: maturase Location: 51 04-5326 bp Feature: gene Location: 5519-5665 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5531-5642 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5531 -5642 bp Feature: gene Location: 5843-9766 bp Feature: domain Description: ESPR Location: 5846-5915 bp Feature: domain Description: ESPR Location: 5846-591 5 bp Feature: domain Description: O_hepto_targRPT Location: 6011-6122 bp Feature: domain Description: O_hepto_targRPT Location: 601 1 -61 22 bp Feature: domain Description: O_hepto_targRPT Location: 6128-6236 bp Feature: domain Description: O_hepto_targRPT Location: 61 28-6236 bp Feature: domain Description: O_hepto_targRPT Location: 6239-6347 bp Feature: domain Description: O_hepto_targRPT Location: 6239-6347 bp Feature: domain Description: O_hepto_targRPT Location: 6359-6461 bp Feature: domain Description: O_hepto_targRPT Location: 6359-6461 bp Feature: domain Description: O_hepto_targRPT Location: 6464-6572 bp Feature: domain Description: O_hepto_targRPT Location: 6464-6572 bp Feature: domain Description: O_hepto_targRPT Location: 6578-6686 bp Feature: domain Description: O_hepto_targRPT Location: 6578-6686 bp Feature: domain Description: O_hepto_targRPT Location: 6692-6800 bp Feature: domain Description: O_hepto_targRPT Location: 6692-6800 bp Feature: domain Description: O_hepto_targRPT Location: 6809-6914 bp Feature: domain Description: O_hepto_targRPT Location: 6809-691 4 bp Feature: domain Description: O_hepto_targRPT Location: 6917-7025 bp Feature: domain Description: O_hepto_targRPT Location: 691 7-7025 bp Feature: domain Description: O_hepto_targRPT Location: 7028-7139 bp Feature: domain Description: O_hepto_targRPT Location: 7028-71 39 bp Feature: domain Description: O_hepto_targRPT Location: 7142-7253 bp Feature: domain Description: O_hepto_targRPT Location: 71 42-7253 bp Feature: domain Description: O_hepto_targRPT Location: 7256-7364 bp Feature: domain Description: O_hepto_targRPT Location: 7256-7364 bp Feature: domain Description: O_hepto_targRPT Location: 7367-7472 bp Feature: domain Description: O_hepto_targRPT Location: 7367-7472 bp Feature: domain Description: O_hepto_targRPT Location: 7478-7586 bp Feature: domain Description: O_hepto_targRPT Location: 7478-7586 bp Feature: domain Description: O_hepto_targRPT Location: 7589-7700 bp Feature: domain Description: O_hepto_targRPT Location: 7589-7700 bp Feature: domain Description: O_hepto_targRPT Location: 7706-7811 bp Feature: domain Description: O_hepto_targRPT Location: 7706-781 1 bp Feature: domain Description: O_hepto_targRPT Location: 7868-7976 bp Feature: domain Description: O_hepto_targRPT Location: 7868-7976 bp Feature: domain Description: autotrans_barl Location: 8441-9764 bp Feature: domain Description: autotrans_barl Location: 8441 -9764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ESPR (pfam13018), O_hepto_targRPT (TIGR04415), autotrans_barl (TIGR01414)