myRT

myRT report for GCA_002225765.1_ASM222576v1

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Seq: NLFZ01000106.1 Escherichia coli strain MOD1-EC5742 MOD1-EC5742_106_length_3286_cov_24.062, whole genome shotgun sequence (3286 bp)
Overview 1 RT 1: 187-3144 bp Neighborhood of RT #1 [187, 3167] RVT-GII GIIM PHA02517 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 187-1710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1 1 92 bp Feature: domain Description: GIIM Note: maturase Location: 1267-1465 bp Feature: domain Description: GIIM Note: maturase Location: 1 267-1 465 bp Feature: gene Location: 2302-2514 bp Feature: domain Description: PHA02517 Location: 2305-2449 bp Feature: domain Description: PHA0251 7 Location: 2305-2449 bp Feature: gene Location: 2736-3167 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2742-3012 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2742-301 2 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3033-3144 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3033-31 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: NLFZ01000030.1 Escherichia coli strain MOD1-EC5742 MOD1-EC5742_30_length_55250_cov_24.4278, whole genome shotgun sequence (55250 bp)
Overview 1 RT 1: 39972-45532 bp Neighborhood of RT #1 [39972, 45537] RVT-Retrons Q P Feature: gene Location: 39972-40307 bp Feature: gene Location: 40570-40731 bp Feature: gene Location: 40764-42704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41088-41712 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41088-41712 bp Feature: gene Location: 42746-43771 bp Feature: domain Description: Q Location: 42749-43766 bp Feature: domain Description: Q Location: 42 749-43766 bp Feature: gene Location: 43771-45537 bp Feature: domain Description: P Location: 43798-45532 bp Feature: domain Description: P Location: 43798-45532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535)