myRT

myRT report for GCA_002226065.1_ASM222606v1

Download annotations/find similar RTs

Seq: NLGJ01000002.1 Escherichia coli strain MOD1-EC5732 MOD1-EC5732_2_length_333116_cov_69.0246, whole genome shotgun sequence (333116 bp)
Overview 1 RT 1: 247959-252883 bp Neighborhood of RT #1 [247959, 252883] COG3378 RVT-UG7 PRK09692 Feature: gene Location: 247959-248714 bp Feature: domain Description: COG3378 Location: 247965-248703 bp Feature: domain Description: COG3378 Location: 247965-248703 bp Feature: gene Location: 248913-249653 bp Feature: gene Location: 249650-251278 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 250058-250487 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 250058-250487 bp Feature: gene Location: 251271-252455 bp Feature: domain Description: PRK09692 Location: 251277-252432 bp Feature: domain Description: PRK09692 Location: 251 277-252432 bp Feature: gene Location: 252731-252883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3378 (Phage- or plasmid-associated DNA primase ), RVT-UG7, PRK09692 (Integrase; provisional)

Seq: NLGJ01000060.1 Escherichia coli strain MOD1-EC5732 MOD1-EC5732_60_length_2272_cov_251.054, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)