myRT

myRT report for GCA_002226115.1_ASM222611v1

Download annotations/find similar RTs

Seq: NLGM01000112.1 Escherichia coli strain MOD1-EC5729 MOD1-EC5729_112_length_2272_cov_121.416, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NLGM01000055.1 Escherichia coli strain MOD1-EC5729 MOD1-EC5729_55_length_24683_cov_34.4284, whole genome shotgun sequence (24683 bp)
Overview 1 RT 1: 3-2738 bp Neighborhood of RT #1 [3, 2743] RVT-Retrons pyrE rph Feature: gene Location: 3-1022 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 138-687 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 138-687 bp Feature: gene Location: 1320-1976 bp Feature: domain Description: pyrE Location: 1338-1971 bp Feature: domain Description: pyrE Location: 1338-1971 bp Feature: gene Location: 2027-2743 bp Feature: domain Description: rph Location: 2030-2738 bp Feature: domain Description: rph Location: 2 030-2 738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrE (TIGR00336), rph (PRK00173), RVT-Retrons