myRT

myRT report for GCA_002226315.1_ASM222631v1

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Seq: NLGI01000010.1 Escherichia coli strain MOD1-EC5733 MOD1-EC5733_10_length_139044_cov_95.8502, whole genome shotgun sequence (139044 bp)
Overview 1 RT 1: 531-7981 bp Neighborhood of RT #1 [531, 7992] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 531-2549 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1101-1551 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 1 01 -1 551 bp Feature: gene Location: 3805-5265 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4180-4387 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 41 80-4387 bp Feature: domain Description: INT_P4_C Location: 4606-5143 bp Feature: domain Description: INT_P4_C Location: 4606-51 43 bp Feature: gene Location: 5410-7992 bp Feature: domain Description: mutS1 Location: 5461-7981 bp Feature: domain Description: mutS1 Location: 5461 -7981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)

Seq: NLGI01000005.1 Escherichia coli strain MOD1-EC5733 MOD1-EC5733_5_length_180976_cov_96.8056, whole genome shotgun sequence (180976 bp)
Overview 1 RT 1: 46462-49040 bp Neighborhood of RT #1 [46462, 49042] PyrBI_leader RVT-GII GIIM DUF932 Antirestrict Feature: gene Location: 46462-46674 bp Feature: domain Description: PyrBI_leader Location: 46546-46672 bp Feature: domain Description: PyrBI_leader Location: 46546-46672 bp Feature: gene Location: 46677-46895 bp Feature: gene Location: 47145-48221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47343-47868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47343-47868 bp Feature: domain Description: GIIM Note: maturase Location: 47919-48084 bp Feature: domain Description: GIIM Note: maturase Location: 47919-48084 bp Feature: gene Location: 48023-48481 bp Feature: domain Description: DUF932 Location: 48065-48446 bp Feature: domain Description: DUF932 Location: 48065-48446 bp Feature: gene Location: 48563-49042 bp Feature: domain Description: Antirestrict Location: 48755-49040 bp Feature: domain Description: Antirestrict Location: 48755-49040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PyrBI_leader (pfam08052), RVT-GII, GIIM (pfam08388), DUF932 (pfam06067), Antirestrict (pfam03230)