myRT

myRT report for GCA_002226585.1_ASM222658v1

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Seq: NLHM01000001.1 Escherichia coli strain MOD1-EC5699 MOD1-EC5699_1_length_595426_cov_47.6566, whole genome shotgun sequence (595426 bp)
Overview 1 RT 1: 76153-82940 bp Neighborhood of RT #1 [76153, 83830] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 76153-77172 bp Feature: domain Description: Q Location: 76156-77167 bp Feature: domain Description: Q Location: 761 56-771 67 bp Feature: gene Location: 77215-77922 bp Feature: gene Location: 77919-79109 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 78069-78651 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 78069-78651 bp Feature: gene Location: 79660-81204 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 80077-80530 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 80077-80530 bp Feature: gene Location: 81370-81630 bp Feature: gene Location: 81692-83830 bp Feature: domain Description: Phage_GPA Location: 81953-82940 bp Feature: domain Description: Phage_GPA Location: 81 953-82940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)

Seq: NLHM01000006.1 Escherichia coli strain MOD1-EC5699 MOD1-EC5699_6_length_250130_cov_48.2037, whole genome shotgun sequence (250130 bp)
Overview 1 RT 1: 101151-103873 bp Neighborhood of RT #1 [101151, 103959] PyrBI_leader RVT-GII GIIM RVT-GII CdiI_3 Feature: gene Location: 101151-101363 bp Feature: domain Description: PyrBI_leader Location: 101235-101361 bp Feature: domain Description: PyrBI_leader Location: 1012 35-101361 bp Feature: gene Location: 101366-101584 bp Feature: gene Location: 101834-102604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101837-102251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101837-102 2 51 bp Feature: domain Description: GIIM Note: maturase Location: 102302-102467 bp Feature: domain Description: GIIM Note: maturase Location: 102 302 -102 467 bp Feature: gene Location: 102643-103125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102964-103051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 964-103051 bp Feature: gene Location: 103108-103572 bp Feature: gene Location: 103573-103959 bp Feature: domain Description: CdiI_3 Location: 103597-103873 bp Feature: domain Description: CdiI_3 Location: 103597-103873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PyrBI_leader (pfam08052), RVT-GII, GIIM (pfam08388), CdiI_3 (pfam18616)