myRT

myRT report for GCA_002227565.1_ASM222756v1

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Seq: NLJI01000027.1 Escherichia coli strain MOD1-EC5651 MOD1-EC5651_27_length_59188_cov_41.1923, whole genome shotgun sequence (59188 bp)
Overview 1 RT 1: 56234-59182 bp Neighborhood of RT #1 [56234, 59187] RVT-GII GIIM PHA02517 Feature: gene Location: 56234-56518 bp Feature: gene Location: 56589-56936 bp Feature: gene Location: 57254-58777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57527-58259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57527-58259 bp Feature: domain Description: GIIM Note: maturase Location: 58334-58532 bp Feature: domain Description: GIIM Note: maturase Location: 58334-58532 bp Feature: gene Location: 58906-59187 bp Feature: domain Description: PHA02517 Location: 58909-59182 bp Feature: domain Description: PHA0251 7 Location: 58909-591 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NLJI01000006.1 Escherichia coli strain MOD1-EC5651 MOD1-EC5651_6_length_179868_cov_46.2927, whole genome shotgun sequence (179868 bp)
Overview 1 RT 1: 12447-16687 bp Neighborhood of RT #1 [12447, 16687] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 12447-13115 bp Feature: domain Description: TIGR02646 Location: 12513-12909 bp Feature: domain Description: TIGR02 646 Location: 12 513-12 909 bp Feature: gene Location: 13112-14767 bp Feature: domain Description: COG3950 Location: 13268-14714 bp Feature: domain Description: COG3950 Location: 132 68-14714 bp Feature: gene Location: 14764-15699 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14866-15460 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14866-15460 bp Feature: gene Location: 15919-16089 bp Feature: gene Location: 16352-16687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons