myRT

myRT report for GCA_002228465.1_ASM222846v1

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Seq: NLKZ01000128.1 Escherichia coli strain MOD1-EC5574 MOD1-EC5574_128_length_5230_cov_58.4566, whole genome shotgun sequence (5230 bp)
Overview 1 RT 1: 281-2905 bp Neighborhood of RT #1 [281, 2931] RVT-GII DcuC Feature: gene Location: 281-430 bp Feature: gene Location: 478-924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-886 bp Feature: gene Location: 1146-1517 bp Feature: gene Location: 1570-2931 bp Feature: domain Description: DcuC Location: 1573-2905 bp Feature: domain Description: DcuC Location: 1 573-2905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII

Seq: NLKZ01000040.1 Escherichia coli strain MOD1-EC5574 MOD1-EC5574_40_length_45743_cov_67.6812, whole genome shotgun sequence (45743 bp)
Overview 1 RT 1: 21733-25615 bp Neighborhood of RT #1 [21733, 25620] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 21733-22449 bp Feature: domain Description: rph Location: 21736-22444 bp Feature: domain Description: rph Location: 2 1736-2 2 444 bp Feature: gene Location: 22500-23156 bp Feature: domain Description: pyrE Location: 22518-23151 bp Feature: domain Description: pyrE Location: 2 2 518-2 3151 bp Feature: gene Location: 23454-24413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23589-24138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3589-2 4138 bp Feature: gene Location: 24459-25055 bp Feature: domain Description: slmA Location: 24465-25041 bp Feature: domain Description: slmA Location: 2 4465-2 5041 bp Feature: gene Location: 25162-25620 bp Feature: domain Description: dut Location: 25168-25615 bp Feature: domain Description: dut Location: 2 5168-2 5615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)