myRT

myRT report for GCA_002228485.1_ASM222848v1

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Seq: NLLA01000113.1 Escherichia coli strain MOD1-EC5573 MOD1-EC5573_113_length_5230_cov_27.1445, whole genome shotgun sequence (5230 bp)
Overview 1 RT 1: 281-2905 bp Neighborhood of RT #1 [281, 2931] RVT-GII DcuC Feature: gene Location: 281-430 bp Feature: gene Location: 478-924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-886 bp Feature: gene Location: 1146-1517 bp Feature: gene Location: 1570-2931 bp Feature: domain Description: DcuC Location: 1573-2905 bp Feature: domain Description: DcuC Location: 1 573-2905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII

Seq: NLLA01000040.1 Escherichia coli strain MOD1-EC5573 MOD1-EC5573_40_length_46211_cov_107.159, whole genome shotgun sequence (46211 bp)
Overview 1 RT 1: 22204-26086 bp Neighborhood of RT #1 [22204, 26091] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 22204-22920 bp Feature: domain Description: rph Location: 22207-22915 bp Feature: domain Description: rph Location: 2 2 2 07-2 2 915 bp Feature: gene Location: 22971-23627 bp Feature: domain Description: pyrE Location: 22989-23622 bp Feature: domain Description: pyrE Location: 2 2 989-2 362 2 bp Feature: gene Location: 23925-24884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24060-24609 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 4060-2 4609 bp Feature: gene Location: 24930-25526 bp Feature: domain Description: slmA Location: 24936-25512 bp Feature: domain Description: slmA Location: 2 4936-2 5512 bp Feature: gene Location: 25633-26091 bp Feature: domain Description: dut Location: 25639-26086 bp Feature: domain Description: dut Location: 2 5639-2 6086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)