myRT

myRT report for GCA_002228935.1_ASM222893v1

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Seq: NLMR01000002.1 Escherichia coli strain MOD1-EC5526 MOD1-EC5526_2_length_231044_cov_48.544, whole genome shotgun sequence (231044 bp)
Overview 1 RT 1: 224484-229503 bp Neighborhood of RT #1 [224484, 229503] P Q RVT-Retrons Feature: gene Location: 224484-226250 bp Feature: domain Description: P Location: 224508-226245 bp Feature: domain Description: P Location: 224508-226245 bp Feature: gene Location: 226250-227275 bp Feature: domain Description: Q Location: 226253-227267 bp Feature: domain Description: Q Location: 226253-227267 bp Feature: gene Location: 227311-228240 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227410-227995 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22741 0-227995 bp Feature: gene Location: 228242-229012 bp Feature: gene Location: 229348-229503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons

Seq: NLMR01000049.1 Escherichia coli strain MOD1-EC5526 MOD1-EC5526_49_length_24631_cov_51.4667, whole genome shotgun sequence (24631 bp)
Overview 1 RT 1: 10559-13473 bp Neighborhood of RT #1 [10559, 13538] RVT-GII GIIM PHA02517 Feature: gene Location: 10559-10702 bp Feature: gene Location: 10727-10930 bp Feature: gene Location: 10998-12521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11271-12003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 71-12 003 bp Feature: domain Description: GIIM Note: maturase Location: 12078-12276 bp Feature: domain Description: GIIM Note: maturase Location: 12 078-12 2 76 bp Feature: gene Location: 12475-12900 bp Feature: gene Location: 13113-13538 bp Feature: domain Description: PHA02517 Location: 13137-13473 bp Feature: domain Description: PHA02 517 Location: 13137-13473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)