myRT

myRT report for GCA_002229125.1_ASM222912v1

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Seq: NLMI01000023.1 Escherichia coli strain MOD1-EC5536 MOD1-EC5536_23_length_254836_cov_113.2, whole genome shotgun sequence (254836 bp)
Overview 1 RT 1: 10133-14664 bp Neighborhood of RT #1 [10133, 14675] LacI PBP1_GntR RVT-GII GIIM RVT-GII CAD1 Feature: gene Location: 10133-11164 bp Feature: domain Description: LacI Location: 10175-10310 bp Feature: domain Description: LacI Location: 1 01 75-1 031 0 bp Feature: domain Description: PBP1_GntR Location: 10349-11159 bp Feature: domain Description: PBP1 _GntR Location: 1 0349-1 1 1 59 bp Feature: gene Location: 11198-11383 bp Feature: gene Location: 11691-12542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11694-12102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 694-1 21 02 bp Feature: domain Description: GIIM Note: maturase Location: 12150-12375 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 50-1 2375 bp Feature: gene Location: 12515-12949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12707-12923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2707-1 2923 bp Feature: gene Location: 13354-13581 bp Feature: gene Location: 13614-14675 bp Feature: domain Description: CAD1 Location: 13674-14664 bp Feature: domain Description: CAD1 Location: 1 3674-1 4664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388), CAD1 (cd05283)

Seq: NLMI01000006.1 Escherichia coli strain MOD1-EC5536 MOD1-EC5536_6_length_20476_cov_226.9, whole genome shotgun sequence (20476 bp)
Overview 1 RT 1: 1336-6869 bp Neighborhood of RT #1 [1336, 6883] conj_TOL_TraD RVT-GII GIIM DUF1706 Feature: gene Location: 1336-2034 bp Feature: gene Location: 2031-4127 bp Feature: domain Description: conj_TOL_TraD Location: 2052-3987 bp Feature: domain Description: conj_TOL_TraD Location: 2 052 -3987 bp Feature: gene Location: 4120-5289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4729-4912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472 9-4912 bp Feature: domain Description: GIIM Note: maturase Location: 4990-5212 bp Feature: domain Description: GIIM Note: maturase Location: 4990-52 12 bp Feature: gene Location: 5809-6081 bp Feature: gene Location: 6371-6883 bp Feature: domain Description: DUF1706 Location: 6374-6869 bp Feature: domain Description: DUF1706 Location: 6374-6869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_TOL_TraD (TIGR03754), RVT-GII, GIIM (pfam08388), DUF1706 (pfam08020)