myRT

myRT report for GCA_002229195.1_ASM222919v1

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Seq: NLND01000019.1 Escherichia coli strain MOD1-EC5513 MOD1-EC5513_19_length_102372_cov_27.8524, whole genome shotgun sequence (102372 bp)
Overview 1 RT 1: 43350-49469 bp Neighborhood of RT #1 [43350, 49474] RhsA RhsA RVT-GII GIIM YhhI YhhI YhhI PRK10438 Feature: gene Location: 43350-44906 bp Feature: domain Description: RhsA Location: 43368-43617 bp Feature: domain Description: RhsA Location: 43368-4361 7 bp Feature: domain Description: RhsA Location: 43737-44526 bp Feature: domain Description: RhsA Location: 43737-44526 bp Feature: gene Location: 44903-45370 bp Feature: gene Location: 45821-47320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46274-46931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46274-46931 bp Feature: domain Description: GIIM Note: maturase Location: 47021-47225 bp Feature: domain Description: GIIM Note: maturase Location: 47021 -47225 bp Feature: gene Location: 47527-48663 bp Feature: domain Description: YhhI Location: 47530-47893 bp Feature: domain Description: YhhI Location: 47530-47893 bp Feature: domain Description: YhhI Location: 47950-48304 bp Feature: domain Description: YhhI Location: 47950-48304 bp Feature: domain Description: YhhI Location: 48319-48562 bp Feature: domain Description: YhhI Location: 4831 9-48562 bp Feature: gene Location: 48704-49474 bp Feature: domain Description: PRK10438 Location: 48707-49469 bp Feature: domain Description: PRK1 0438 Location: 48707-49469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RVT-GII, GIIM (pfam08388), YhhI (COG5433), PRK10438 (C-N hydrolase family amidase; Provisional)