myRT

myRT report for GCA_002229215.1_ASM222921v1

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Seq: NLOQ01000015.1 Escherichia coli strain MOD1-EC5471 MOD1-EC5471_15_length_112830_cov_28.23, whole genome shotgun sequence (112830 bp)
Overview 1 RT 1: 39281-42958 bp Neighborhood of RT #1 [39281, 42958] RVT-GII Intron_maturas2 HNHc PRK13732 Feature: gene Location: 39281-39487 bp Feature: gene Location: 39821-40030 bp Feature: gene Location: 40165-42066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40432-41263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40432-41 263 bp Feature: domain Description: Intron_maturas2 Location: 41377-41635 bp Feature: domain Description: Intron_maturas2 Location: 41 377-41 635 bp Feature: domain Description: HNHc Note: nucleases Location: 41809-41971 bp Feature: domain Description: HNHc Note: nucleases Location: 41 809-41 971 bp Feature: gene Location: 42261-42707 bp Feature: domain Description: PRK13732 Location: 42267-42705 bp Feature: domain Description: PRK1 3732 Location: 42267-42705 bp Feature: gene Location: 42770-42958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional)

Seq: NLOQ01000031.1 Escherichia coli strain MOD1-EC5471 MOD1-EC5471_31_length_55202_cov_48.9752, whole genome shotgun sequence (55200 bp)
Overview 1 RT 1: 40092-45652 bp Neighborhood of RT #1 [40092, 45657] RVT-Retrons Q P Feature: gene Location: 40092-40427 bp Feature: gene Location: 40699-40842 bp Feature: gene Location: 40884-42824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41208-41832 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 412 08-41832 bp Feature: gene Location: 42866-43891 bp Feature: domain Description: Q Location: 42872-43886 bp Feature: domain Description: Q Location: 42 872 -43886 bp Feature: gene Location: 43891-45657 bp Feature: domain Description: P Location: 43918-45652 bp Feature: domain Description: P Location: 43918-45652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535)