myRT

myRT report for GCA_002229385.1_ASM222938v1

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Seq: NLNE01000077.1 Escherichia coli strain MOD1-EC5512 MOD1-EC5512_77_length_6008_cov_21.0628, whole genome shotgun sequence (6008 bp)
Overview 1 RT 1: 3094-5829 bp Neighborhood of RT #1 [3094, 5969] DDE_Tnp_IS66 DDE_Tnp_IS66_C PHA02517 RVT-GII GIIM Feature: gene Location: 3094-3612 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3112-3457 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 1 2-3457 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3478-3589 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3478-3589 bp Feature: gene Location: 3747-3959 bp Feature: domain Description: PHA02517 Location: 3750-3894 bp Feature: domain Description: PHA0251 7 Location: 3750-3894 bp Feature: gene Location: 4551-5969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4824-5556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4824-5556 bp Feature: domain Description: GIIM Note: maturase Location: 5631-5829 bp Feature: domain Description: GIIM Note: maturase Location: 5631 -5829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)