myRT

myRT report for GCA_002229505.1_ASM222950v1

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Seq: NLMY01000134.1 Escherichia coli strain MOD1-EC5518 MOD1-EC5518_134_length_2452_cov_147.375, whole genome shotgun sequence (2452 bp)
Overview 1 RT 1: 662-2306 bp Neighborhood of RT #1 [662, 2362] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 662-2362 bp Feature: RT Description: RVT_N Location: 716-959 bp Feature: RT Description: RVT_N Location: 71 6-959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-1640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 004-1 640 bp Feature: domain Description: GIIM Note: maturase Location: 1691-1925 bp Feature: domain Description: GIIM Note: maturase Location: 1 691 -1 925 bp Feature: domain Description: HNHc Note: nucleases Location: 2156-2306 bp Feature: domain Description: HNHc Note: nucleases Location: 21 56-2306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NLMY01000028.1 Escherichia coli strain MOD1-EC5518 MOD1-EC5518_28_length_64677_cov_47.6484, whole genome shotgun sequence (64677 bp)
Overview 1 RT 1: 49298-52787 bp Neighborhood of RT #1 [49298, 52828] RVT-GII GIIM zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 49298-49573 bp Feature: gene Location: 49706-49873 bp Feature: gene Location: 49899-51131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50100-50754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50100-50754 bp Feature: domain Description: GIIM Note: maturase Location: 50832-51054 bp Feature: domain Description: GIIM Note: maturase Location: 50832 -51054 bp Feature: gene Location: 51224-51385 bp Feature: gene Location: 51593-52828 bp Feature: domain Description: zf-IS66 Location: 51821-51905 bp Feature: domain Description: zf-IS66 Location: 5182 1-51905 bp Feature: domain Description: DDE_Tnp_IS66 Location: 51950-52787 bp Feature: domain Description: DDE_Tnp_IS66 Location: 51950-52 787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)