myRT

myRT report for GCA_002229605.1_ASM222960v1

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Seq: NLOO01000045.1 Escherichia coli strain MOD1-EC5473 MOD1-EC5473_45_length_36268_cov_105.545, whole genome shotgun sequence (36268 bp)
Overview 1 RT 1: 34874-36229 bp Neighborhood of RT #1 [34874, 36229] Rop RVT-GII Feature: gene Location: 34874-35053 bp Feature: domain Description: Rop Location: 34886-34937 bp Feature: domain Description: Rop Location: 34886-34937 bp Feature: gene Location: 35191-35337 bp Feature: gene Location: 35633-35938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35636-35888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35636-35888 bp Feature: gene Location: 35969-36229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rop (pfam01815), RVT-GII

Seq: NLOO01000089.1 Escherichia coli strain MOD1-EC5473 MOD1-EC5473_90_length_10789_cov_120.198, whole genome shotgun sequence (10789 bp)
Overview 1 RT 1: 1212-4692 bp Neighborhood of RT #1 [1212, 4697] RVT-UG4 LuxR_C_like PRK10954 Feature: gene Location: 1212-1643 bp Feature: gene Location: 1685-2665 bp Feature: gene Location: 2698-3696 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3037-3481 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3037-3481 bp Feature: gene Location: 3722-4021 bp Feature: domain Description: LuxR_C_like Location: 3797-3950 bp Feature: domain Description: LuxR_C_like Location: 3797-3950 bp Feature: gene Location: 4059-4697 bp Feature: domain Description: PRK10954 Location: 4080-4692 bp Feature: domain Description: PRK10954 Location: 4080-4692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, LuxR_C_like (cd06170), PRK10954 (thiol:disulfide interchange protein DsbA)