myRT

myRT report for GCA_002229615.1_ASM222961v1

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Seq: NLOZ01000026.1 Escherichia coli strain MOD1-EC5459 MOD1-EC5459_26_length_51843_cov_40.5221, whole genome shotgun sequence (51843 bp)
Overview 1 RT 1: 46850-51234 bp Neighborhood of RT #1 [46850, 51234] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 46850-47083 bp Feature: domain Description: DUF905 Location: 46880-47078 bp Feature: domain Description: DUF905 Location: 46880-47078 bp Feature: gene Location: 47141-47581 bp Feature: domain Description: PRK13732 Location: 47147-47579 bp Feature: domain Description: PRK1 3732 Location: 471 47-47579 bp Feature: gene Location: 47776-49677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48043-48874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48043-48874 bp Feature: domain Description: Intron_maturas2 Location: 48988-49246 bp Feature: domain Description: Intron_maturas2 Location: 48988-49246 bp Feature: domain Description: HNHc Note: nucleases Location: 49420-49582 bp Feature: domain Description: HNHc Note: nucleases Location: 49420-49582 bp Feature: gene Location: 50240-50782 bp Feature: gene Location: 51040-51234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NLOZ01000005.1 Escherichia coli strain MOD1-EC5459 MOD1-EC5459_5_length_230833_cov_32.0485, whole genome shotgun sequence (230833 bp)
Overview 1 RT 1: 129512-136877 bp Neighborhood of RT #1 [129512, 137014] XerC RVT-UG8 RVT-UG3 INT_Rci_Hp1_C INT_P4_C Feature: gene Location: 129512-130831 bp Feature: domain Description: XerC Location: 129722-130724 bp Feature: domain Description: XerC Location: 12 972 2 -13072 4 bp Feature: gene Location: 131088-131228 bp Feature: gene Location: 131440-133449 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 132013-132457 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 132 013-132 457 bp Feature: gene Location: 133446-134717 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 133728-134223 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 13372 8-1342 2 3 bp Feature: gene Location: 134937-135494 bp Feature: gene Location: 135548-137014 bp Feature: domain Description: INT_Rci_Hp1_C Location: 135926-136136 bp Feature: domain Description: INT_Rci_Hp1_C Location: 13592 6-136136 bp Feature: domain Description: INT_P4_C Location: 136355-136877 bp Feature: domain Description: INT_P4_C Location: 136355-136877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-UG8, RVT-UG3, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801)