myRT

myRT report for GCA_002229785.1_ASM222978v1

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Seq: NLNM01000113.1 Escherichia coli strain MOD1-EC5504 MOD1-EC5504_113_length_2276_cov_116.842, whole genome shotgun sequence (2276 bp)
Overview 1 RT 1: 93-2275 bp Neighborhood of RT #1 [93, 2275] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NLNM01000061.1 Escherichia coli strain MOD1-EC5504 MOD1-EC5504_61_length_16037_cov_34.2481, whole genome shotgun sequence (16037 bp)
Overview 1 RT 1: 1777-4953 bp Neighborhood of RT #1 [1777, 4953] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 1777-2559 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1783-2518 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1783-2 518 bp Feature: gene Location: 2767-2928 bp Feature: gene Location: 3021-4253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3222-3876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 2 2 -3876 bp Feature: domain Description: GIIM Note: maturase Location: 3954-4176 bp Feature: domain Description: GIIM Note: maturase Location: 3954-4176 bp Feature: gene Location: 4369-4515 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4381-4492 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4381-4492 bp Feature: gene Location: 4756-4953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: NLNM01000063.1 Escherichia coli strain MOD1-EC5504 MOD1-EC5504_63_length_14773_cov_50.2484, whole genome shotgun sequence (14773 bp)
Overview 1 RT 1: 4328-7217 bp Neighborhood of RT #1 [4328, 7217] RVT-GII GIIM RVT-GII Feature: gene Location: 4328-4546 bp Feature: gene Location: 4589-4759 bp Feature: gene Location: 4922-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4925-5333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4925-53 3 3 bp Feature: domain Description: GIIM Note: maturase Location: 5381-5573 bp Feature: domain Description: GIIM Note: maturase Location: 53 81-5573 bp Feature: gene Location: 5548-5982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5740-5956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5740-5956 bp Feature: gene Location: 6151-6348 bp Feature: gene Location: 6891-7217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)