myRT

myRT report for GCA_002231325.1_ASM223132v1

Download annotations/find similar RTs

Seq: NLSB01000003.1 Escherichia coli strain MOD1-EC5113 MOD1-EC5113_3_length_342316_cov_65.2404, whole genome shotgun sequence (342316 bp)
Overview 1 RT 1: 3-5156 bp Neighborhood of RT #1 [3, 5161] RhsA RVT-GII GIIM YhhI YhhI YhhI PRK10438 Feature: gene Location: 3-593 bp Feature: domain Description: RhsA Location: 9-213 bp Feature: domain Description: RhsA Location: 9-21 3 bp Feature: gene Location: 590-1057 bp Feature: gene Location: 1508-3007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1961-2618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 961 -261 8 bp Feature: domain Description: GIIM Note: maturase Location: 2708-2912 bp Feature: domain Description: GIIM Note: maturase Location: 2708-291 2 bp Feature: gene Location: 3214-4350 bp Feature: domain Description: YhhI Location: 3217-3580 bp Feature: domain Description: YhhI Location: 321 7-3580 bp Feature: domain Description: YhhI Location: 3637-3991 bp Feature: domain Description: YhhI Location: 3637-3991 bp Feature: domain Description: YhhI Location: 4006-4249 bp Feature: domain Description: YhhI Location: 4006-4249 bp Feature: gene Location: 4391-5161 bp Feature: domain Description: PRK10438 Location: 4394-5156 bp Feature: domain Description: PRK1 0438 Location: 4394-51 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433), RhsA (COG3209)