myRT

myRT report for GCA_002231355.1_ASM223135v1

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Seq: NLQP01000139.1 Escherichia coli strain MOD1-EC5213 MOD1-EC5213_141_length_2272_cov_194.204, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NLQP01000027.1 Escherichia coli strain MOD1-EC5213 MOD1-EC5213_27_length_61284_cov_53.4271, whole genome shotgun sequence (61284 bp)
Overview 1 RT 1: 4584-8466 bp Neighborhood of RT #1 [4584, 8471] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 4584-5042 bp Feature: domain Description: dut Location: 4590-5037 bp Feature: domain Description: dut Location: 4590-5037 bp Feature: gene Location: 5149-5745 bp Feature: domain Description: slmA Location: 5155-5731 bp Feature: domain Description: slmA Location: 5155-5731 bp Feature: gene Location: 5791-6750 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5926-6475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 592 6-6475 bp Feature: gene Location: 7048-7704 bp Feature: domain Description: pyrE Location: 7066-7699 bp Feature: domain Description: pyrE Location: 7066-7699 bp Feature: gene Location: 7755-8471 bp Feature: domain Description: rph Location: 7758-8466 bp Feature: domain Description: rph Location: 7758-8466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)