myRT

myRT report for GCA_002231655.1_ASM223165v1

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Seq: NLQX01000041.1 Escherichia coli strain MOD1-EC5199 MOD1-EC5199_41_length_27900_cov_42.103, whole genome shotgun sequence (27900 bp)
Overview 1 RT 1: 19571-22930 bp Neighborhood of RT #1 [19571, 22935] PRK09413 RVT-GII GIIM PinE Feature: gene Location: 19571-19768 bp Feature: domain Description: PRK09413 Location: 19574-19736 bp Feature: domain Description: PRK0941 3 Location: 1 9574-1 9736 bp Feature: gene Location: 19823-20173 bp Feature: gene Location: 20244-21596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20565-21183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20565-21 1 83 bp Feature: domain Description: GIIM Note: maturase Location: 21231-21462 bp Feature: domain Description: GIIM Note: maturase Location: 21 231 -21 462 bp Feature: gene Location: 21805-22206 bp Feature: gene Location: 22306-22935 bp Feature: domain Description: PinE Location: 22381-22930 bp Feature: domain Description: PinE Location: 22381 -22930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: NLQX01000096.1 Escherichia coli strain MOD1-EC5199 MOD1-EC5199_96_length_2271_cov_422.846, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 92-2268 bp Neighborhood of RT #1 [92, 2268] RVT-GII GIIM Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1172 -1370 bp Feature: gene Location: 1909-2268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)