myRT

myRT report for GCA_002231715.1_ASM223171v1

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Seq: NLRF01000053.1 Escherichia coli strain MOD1-EC5186 MOD1-EC5186_53_length_13904_cov_64.4924, whole genome shotgun sequence (13904 bp)
Overview 1 RT 1: 3913-6984 bp Neighborhood of RT #1 [3913, 7034] PRK09413 RVT-UG4 PRK10954 Feature: gene Location: 3913-4281 bp Feature: domain Description: PRK09413 Location: 3928-4279 bp Feature: domain Description: PRK0941 3 Location: 3928-4279 bp Feature: gene Location: 4290-5132 bp Feature: gene Location: 5056-6153 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5413-5857 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 541 3-5857 bp Feature: gene Location: 6174-6461 bp Feature: gene Location: 6543-7034 bp Feature: domain Description: PRK10954 Location: 6609-6984 bp Feature: domain Description: PRK1 0954 Location: 6609-6984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-UG4, PRK10954 (thiol:disulfide interchange protein DsbA)

Seq: NLRF01000055.1 Escherichia coli strain MOD1-EC5186 MOD1-EC5186_55_length_12329_cov_66.9838, whole genome shotgun sequence (12329 bp)
Overview 1 RT 1: 8044-12113 bp Neighborhood of RT #1 [8044, 12113] PRK13704 PRK09738 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 8044-8763 bp Feature: domain Description: PRK13704 Location: 8047-8758 bp Feature: domain Description: PRK13704 Location: 8047-8758 bp Feature: gene Location: 9043-9201 bp Feature: domain Description: PRK09738 Location: 9046-9199 bp Feature: domain Description: PRK09738 Location: 9046-9199 bp Feature: gene Location: 9597-11264 bp Feature: domain Description: RVT_N Location: 9645-9882 bp Feature: domain Description: RVT_N Location: 9645-9882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9933-10575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9933-10575 bp Feature: domain Description: GIIM Note: maturase Location: 10626-10860 bp Feature: domain Description: GIIM Note: maturase Location: 1062 6-10860 bp Feature: domain Description: HNHc Note: nucleases Location: 11070-11229 bp Feature: domain Description: HNHc Note: nucleases Location: 11070-112 2 9 bp Feature: gene Location: 11544-11726 bp Feature: gene Location: 11838-12113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13704 (plasmid SOS inhibition protein A; Provisional), PRK09738 (small toxic polypeptide; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)