myRT

myRT report for GCA_002232495.1_ASM223249v1

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Seq: NLSY01000051.1 Escherichia coli strain MOD1-EC5089 MOD1-EC5089_51_length_14183_cov_54.4266, whole genome shotgun sequence (14183 bp)
Overview 1 RT 1: 360-4060 bp Neighborhood of RT #1 [360, 4113] RVT-UG5 Tra5 HTH_Tnp_1 Feature: gene Location: 360-2975 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 456-951 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 456-951 bp Feature: gene Location: 3026-3853 bp Feature: domain Description: Tra5 Location: 3260-3845 bp Feature: domain Description: Tra5 Location: 3260-3845 bp Feature: gene Location: 3847-4113 bp Feature: domain Description: HTH_Tnp_1 Location: 3853-4060 bp Feature: domain Description: HTH_Tnp_1 Location: 3853-4060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, Tra5 (COG2801), HTH_Tnp_1 (pfam01527)

Seq: NLSY01000066.1 Escherichia coli strain MOD1-EC5089 MOD1-EC5089_66_length_4971_cov_54.7445, whole genome shotgun sequence (4971 bp)
Overview 1 RT 1: 1868-4755 bp Neighborhood of RT #1 [1868, 4755] RVT-GII GIIM Feature: gene Location: 1868-2011 bp Feature: gene Location: 2036-2221 bp Feature: gene Location: 2308-3831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2581-3313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 581-3313 bp Feature: domain Description: GIIM Note: maturase Location: 3388-3586 bp Feature: domain Description: GIIM Note: maturase Location: 3388-3586 bp Feature: gene Location: 4125-4562 bp Feature: gene Location: 4567-4755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)