myRT

myRT report for GCA_002232695.1_ASM223269v1

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Seq: NLTZ01000011.1 Escherichia coli strain MOD1-EC5051 MOD1-EC5051_11_length_177039_cov_50.1414, whole genome shotgun sequence (177039 bp)
Overview 1 RT 1: 33838-37720 bp Neighborhood of RT #1 [33838, 37725] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 33838-34554 bp Feature: domain Description: rph Location: 33841-34549 bp Feature: domain Description: rph Location: 33841 -34549 bp Feature: gene Location: 34605-35261 bp Feature: domain Description: pyrE Location: 34623-35256 bp Feature: domain Description: pyrE Location: 34623-35256 bp Feature: gene Location: 35559-36518 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35694-36243 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35694-36243 bp Feature: gene Location: 36564-37160 bp Feature: domain Description: slmA Location: 36570-37146 bp Feature: domain Description: slmA Location: 36570-371 46 bp Feature: gene Location: 37267-37725 bp Feature: domain Description: dut Location: 37273-37720 bp Feature: domain Description: dut Location: 37273-37720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: NLTZ01000001.1 Escherichia coli strain MOD1-EC5051 MOD1-EC5051_1_length_502365_cov_43.538, whole genome shotgun sequence (502365 bp)
Overview 1 RT 1: 450191-452109 bp Neighborhood of RT #1 [450191, 452109] RVT-GII Feature: gene Location: 450191-450373 bp Feature: gene Location: 450557-450928 bp Feature: gene Location: 451221-451586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451494-451563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451494-451563 bp Feature: gene Location: 451612-451740 bp Feature: gene Location: 451861-452109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLTZ01000004.1 Escherichia coli strain MOD1-EC5051 MOD1-EC5051_4_length_275348_cov_44.4458, whole genome shotgun sequence (275348 bp)
Overview 1 RT 1: 198773-204804 bp Neighborhood of RT #1 [198773, 204804] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 198773-199693 bp Feature: domain Description: AbiEii Location: 198815-199556 bp Feature: domain Description: AbiEii Location: 198815-199556 bp Feature: gene Location: 199680-200483 bp Feature: domain Description: AbiEi_3_N Location: 199713-199974 bp Feature: domain Description: AbiEi_3 _N Location: 199713 -199974 bp Feature: domain Description: AbiEi_3 Location: 199989-200442 bp Feature: domain Description: AbiEi_3 Location: 199989-200442 bp Feature: gene Location: 200778-203987 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 201306-201795 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2013 06-201795 bp Feature: domain Description: nitrilase Location: 203301-203898 bp Feature: domain Description: nitrilase Location: 203 3 01-203 898 bp Feature: gene Location: 204148-204288 bp Feature: domain Description: Phage_ASH Location: 204175-204268 bp Feature: domain Description: Phage_ASH Location: 204175-204268 bp Feature: gene Location: 204334-204804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)