myRT

myRT report for GCA_002232935.1_ASM223293v1

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Seq: NLTY01000112.1 Escherichia coli strain MOD1-EC5052 MOD1-EC5052_115_length_1477_cov_58.4129, whole genome shotgun sequence (1477 bp)
Overview 1 RT 1: 93-1230 bp Neighborhood of RT #1 [93, 1475] RVT-GII GIIM Feature: gene Location: 93-1475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225-957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225-957 bp Feature: domain Description: GIIM Note: maturase Location: 1032-1230 bp Feature: domain Description: GIIM Note: maturase Location: 1 032-1 230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NLTY01000052.1 Escherichia coli strain MOD1-EC5052 MOD1-EC5052_52_length_20662_cov_21.4564, whole genome shotgun sequence (20662 bp)
Overview 1 RT 1: 5034-8366 bp Neighborhood of RT #1 [5034, 8398] PinE RVT-GII GIIM PRK09413 Feature: gene Location: 5034-5663 bp Feature: domain Description: PinE Location: 5109-5658 bp Feature: domain Description: PinE Location: 5109-5658 bp Feature: gene Location: 5763-6164 bp Feature: gene Location: 6373-7725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6694-7312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6694-7312 bp Feature: domain Description: GIIM Note: maturase Location: 7360-7591 bp Feature: domain Description: GIIM Note: maturase Location: 7360-7591 bp Feature: gene Location: 7796-8146 bp Feature: gene Location: 8201-8398 bp Feature: domain Description: PRK09413 Location: 8204-8366 bp Feature: domain Description: PRK09413 Location: 82 04-8366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)