myRT

myRT report for GCA_002233505.1_ASM223350v1

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Seq: NLUS01000021.1 Escherichia coli strain MOD1-EC5009 MOD1-EC5009_21_length_84467_cov_23.1299, whole genome shotgun sequence (84467 bp)
Overview 1 RT 1: 47659-51541 bp Neighborhood of RT #1 [47659, 51546] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 47659-48117 bp Feature: domain Description: dut Location: 47665-48112 bp Feature: domain Description: dut Location: 47665-481 1 2 bp Feature: gene Location: 48224-48820 bp Feature: domain Description: slmA Location: 48230-48806 bp Feature: domain Description: slmA Location: 48230-48806 bp Feature: gene Location: 48866-49825 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49001-49550 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49001 -49550 bp Feature: gene Location: 50123-50779 bp Feature: domain Description: pyrE Location: 50141-50774 bp Feature: domain Description: pyrE Location: 501 41 -50774 bp Feature: gene Location: 50830-51546 bp Feature: domain Description: rph Location: 50833-51541 bp Feature: domain Description: rph Location: 50833-51 541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NLUS01000060.1 Escherichia coli strain MOD1-EC5009 MOD1-EC5009_60_length_2279_cov_98.9864, whole genome shotgun sequence (2279 bp)
Overview 1 RT 1: 96-2278 bp Neighborhood of RT #1 [96, 2278] RVT-GII GIIM Feature: gene Location: 96-1619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1101 bp Feature: domain Description: GIIM Note: maturase Location: 1176-1374 bp Feature: domain Description: GIIM Note: maturase Location: 1176-1374 bp Feature: gene Location: 1913-2278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)