myRT

myRT report for GCA_002234385.1_ASM223438v1

Download annotations/find similar RTs

Seq: NMQU01000169.1 Amycolatopsis alba DSM 44262 contig169, whole genome shotgun sequence (16013 bp)
Overview 1 RT 1: 12420-15768 bp Neighborhood of RT #1 [12420, 15800] Hr-like VOC_like RVT-Retrons YjbI TNT Feature: gene Location: 12420-12929 bp Ori: OXM42917.1 Feature: domain Description: Hr-like Location: 12471-12855 bp Feature: domain Description: Hr-like Location: 1 2471 -1 2855 bp Feature: gene Location: 12998-13480 bp Ori: OXM42918.1 Feature: domain Description: VOC_like Location: 13031-13373 bp Feature: domain Description: VOC_like Location: 1 3031 -1 3373 bp Feature: gene Location: 13662-14705 bp Ori: OXM42919.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13821-14457 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3821 -1 4457 bp Feature: gene Location: 14710-15297 bp Ori: OXM42920.1 Feature: domain Description: YjbI Location: 14767-15238 bp Feature: domain Description: YjbI Location: 1 4767-1 5238 bp Feature: gene Location: 15366-15800 bp Ori: OXM42922.1 Feature: domain Description: TNT Location: 15516-15768 bp Feature: domain Description: TNT Location: 1 551 6-1 5768 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NMQU01000127.1 Amycolatopsis alba DSM 44262 contig127, whole genome shotgun sequence (35426 bp)
Overview 1 RT 1: 20308-23537 bp Neighborhood of RT #1 [20308, 23537] QueC RVT-CRISPR-like YfmG Feature: gene Location: 20308-20790 bp Feature: gene Location: 20790-21497 bp Ori: OXM44121.1 Gene: queC Feature: domain Description: QueC Location: 20829-21486 bp Feature: domain Description: QueC Location: 2 082 9-2 1486 bp Feature: gene Location: 21712-22491 bp Ori: OXM44122.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 21916-22453 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 1916-2 2 453 bp Feature: gene Location: 22495-23052 bp Ori: OXM44123.1 Feature: domain Description: YfmG Location: 22609-23047 bp Feature: domain Description: YfmG Location: 2 2 609-2 3047 bp Feature: gene Location: 23049-23537 bp Sorry, your browser does not support inline SVG.
Associated domains: