myRT

myRT report for GCA_002235415.1_ASM223541v1

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Seq: NGXJ01000085.1 Klebsiella pneumoniae strain 42 1078_5444_1728422_817__561__768_, whole genome shotgun sequence (5444 bp)
Overview 1 RT 1: 121-3620 bp Neighborhood of RT #1 [121, 3622] RVT-GII PRK10276 umuC Feature: gene Location: 121-372 bp Feature: gene Location: 372-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1 464 bp Feature: gene Location: 1936-2355 bp Feature: domain Description: PRK10276 Location: 1939-2350 bp Feature: domain Description: PRK1 0276 Location: 1 939-2350 bp Feature: gene Location: 2357-3622 bp Feature: domain Description: umuC Location: 2360-3620 bp Feature: domain Description: umuC Location: 2360-3620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-GII

Seq: NGXJ01000082.1 Klebsiella pneumoniae strain 42 1075_14952_2902264_817______107_, whole genome shotgun sequence (14952 bp)
Overview 1 RT 1: 59-2360 bp Neighborhood of RT #1 [59, 2374] RVT-GII PRK10276 Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Feature: gene Location: 1949-2374 bp Feature: domain Description: PRK10276 Location: 1952-2360 bp Feature: domain Description: PRK102 76 Location: 1952 -2 360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NGXJ01000027.1 Klebsiella pneumoniae strain 42 1013_117325_10167176_222__817_, whole genome shotgun sequence (117325 bp)
Overview 1 RT 1: 114923-116875 bp Neighborhood of RT #1 [114923, 117267] DinI RVT-GII Feature: gene Location: 114923-115165 bp Feature: domain Description: DinI Location: 114974-115154 bp Feature: domain Description: DinI Location: 114974-115154 bp Feature: gene Location: 115532-115783 bp Feature: gene Location: 115783-117267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116185-116875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116185-116875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII

Seq: NGXJ01000026.1 Klebsiella pneumoniae strain 42 1012_191569_17820602_206______817_, whole genome shotgun sequence (191569 bp)
Overview 1 RT 1: 188556-191119 bp Neighborhood of RT #1 [188556, 191511] int RVT-GII Feature: gene Location: 188556-189608 bp Feature: domain Description: int Location: 188559-189558 bp Feature: domain Description: int Location: 188559-189558 bp Feature: gene Location: 189776-190027 bp Feature: gene Location: 190027-191511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190429-191119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1904 29-191119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII

Seq: NGXJ01000068.1 Klebsiella pneumoniae strain 42 1060_3849_1745294_697__962__817_, whole genome shotgun sequence (3849 bp)
Overview 1 RT 1: 987-3399 bp Neighborhood of RT #1 [987, 3791] XerC RVT-GII Feature: gene Location: 987-1409 bp Feature: domain Description: XerC Location: 1023-1368 bp Feature: domain Description: XerC Location: 1023-1368 bp Feature: gene Location: 2056-2307 bp Feature: gene Location: 2307-3791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2709-3399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2709-3399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, XerC (COG4973)

Seq: NGXJ01000020.1 Klebsiella pneumoniae strain 42 1006_4301_1651946_176__893__817_, whole genome shotgun sequence (4301 bp)
Overview 1 RT 1: 1036-4181 bp Neighborhood of RT #1 [1036, 4181] Antirestrict RVT-GII Feature: gene Location: 1036-1461 bp Feature: domain Description: Antirestrict Location: 1171-1459 bp Feature: domain Description: Antirestrict Location: 1171-1459 bp Feature: gene Location: 1982-2212 bp Feature: gene Location: 2446-3930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2848-3538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2848-3538 bp Feature: gene Location: 3930-4181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII

Seq: NGXJ01000084.1 Klebsiella pneumoniae strain 42 1077_90125_8891315_817______526_, whole genome shotgun sequence (90125 bp)
Overview 1 RT 1: 121-2400 bp Neighborhood of RT #1 [121, 2411] RVT-GII PRK10016 Feature: gene Location: 121-372 bp Feature: gene Location: 372-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 7 4-1464 bp Feature: gene Location: 1802-2029 bp Feature: gene Location: 1938-2411 bp Feature: domain Description: PRK10016 Location: 1941-2400 bp Feature: domain Description: PRK10016 Location: 1941-2400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII

Seq: NGXJ01000081.1 Klebsiella pneumoniae strain 42 1074_6370_2494169_817__266__971_, whole genome shotgun sequence (6370 bp)
Overview 1 RT 1: 59-3228 bp Neighborhood of RT #1 [59, 3233] RVT-GII dacD Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Feature: gene Location: 2064-3233 bp Feature: domain Description: dacD Location: 2073-3228 bp Feature: domain Description: dacD Location: 2073-3228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII

Seq: NGXJ01000107.1 Klebsiella pneumoniae strain 42 1100_35034_4785583_971______817_, whole genome shotgun sequence (35034 bp)
Overview 1 RT 1: 31413-34914 bp Neighborhood of RT #1 [31413, 34914] umuC PRK10276 RVT-GII Feature: gene Location: 31413-32678 bp Feature: domain Description: umuC Location: 31416-32676 bp Feature: domain Description: umuC Location: 31416-32676 bp Feature: gene Location: 32681-33100 bp Feature: domain Description: PRK10276 Location: 32684-33095 bp Feature: domain Description: PRK10276 Location: 32684-3309 5 bp Feature: gene Location: 33179-34663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33581-34271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33581-34271 bp Feature: gene Location: 34663-34914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NGXJ01000083.1 Klebsiella pneumoniae strain 42 1076_3200_1453620_817______742_, whole genome shotgun sequence (3200 bp)
Overview 1 RT 1: 59-2205 bp Neighborhood of RT #1 [59, 2205] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Feature: gene Location: 1996-2205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NGXJ01000043.1 Klebsiella pneumoniae strain 42 1032_53217_6242590_432______817_, whole genome shotgun sequence (53217 bp)
Overview 1 RT 1: 50728-53097 bp Neighborhood of RT #1 [50728, 53097] PRK10276 PRK10276 RVT-GII Feature: gene Location: 50728-51045 bp Feature: domain Description: PRK10276 Location: 50734-50848 bp Feature: domain Description: PRK10276 Location: 50734-50848 bp Feature: domain Description: PRK10276 Location: 50875-50944 bp Feature: domain Description: PRK10276 Location: 50875-50944 bp Feature: gene Location: 51045-51284 bp Feature: gene Location: 51362-52846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51764-52454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51764-52454 bp Feature: gene Location: 52846-53097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NGXJ01000123.1 Klebsiella pneumoniae strain 42 1117_10949_3804707_979__478__817_, whole genome shotgun sequence (10949 bp)
Overview 1 RT 1: 7161-10829 bp Neighborhood of RT #1 [7161, 10829] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII Feature: gene Location: 7161-8039 bp Feature: domain Description: Phage_CI_repr Location: 7188-7371 bp Feature: domain Description: Phage_CI_repr Location: 7188-7371 bp Feature: domain Description: Phage_CI_repr Location: 7500-7692 bp Feature: domain Description: Phage_CI_repr Location: 7500-7692 bp Feature: domain Description: Phage_CI_C Location: 7719-8013 bp Feature: domain Description: Phage_CI_C Location: 7719-8013 bp Feature: gene Location: 8051-8995 bp Feature: gene Location: 9094-10578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9496-10186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9496-10186 bp Feature: gene Location: 10578-10829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), RVT-GII