myRT

myRT report for GCA_002235835.1_ASM223583v1

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Seq: NGXY01000059.1 Klebsiella pneumoniae strain 27 539_101980_9983264_297______7_, whole genome shotgun sequence (101980 bp)
Overview 1 RT 1: 1-4579 bp Neighborhood of RT #1 [1, 4579] RVT-Retrons AAA_15 Feature: gene Location: 1-1075 bp Ori: OXP73606.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 181-715 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 81 -71 5 bp Feature: gene Location: 1190-3436 bp Ori: OXP73607.1 Feature: domain Description: AAA_15 Location: 1193-2201 bp Feature: domain Description: AAA_1 5 Location: 1 1 93-2201 bp Feature: gene Location: 4349-4579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175)

Seq: NGXY01000035.1 Klebsiella pneumoniae strain 27 512_38459_5654039_119______364_, whole genome shotgun sequence (38459 bp)
Overview 1 RT 1: 6961-11226 bp Neighborhood of RT #1 [6961, 11231] D PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 6961-8061 bp Ori: OXP77433.1 Feature: domain Description: D Location: 6976-8047 bp Feature: domain Description: D Location: 6976-8047 bp Feature: gene Location: 8152-8370 bp Ori: OXP77434.1 Feature: domain Description: PRK09678 Location: 8155-8353 bp Feature: domain Description: PRK09678 Location: 8155-8353 bp Feature: gene Location: 8774-9547 bp Ori: OXP77435.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8909-9362 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8909-9362 bp Feature: gene Location: 10162-10644 bp Ori: OXP77436.1 Feature: domain Description: SmpB Location: 10192-10636 bp Feature: domain Description: SmpB Location: 10192 -10636 bp Feature: gene Location: 10755-11231 bp Ori: OXP77437.1 Feature: domain Description: PRK10724 Location: 10761-11226 bp Feature: domain Description: PRK1072 4 Location: 10761-112 2 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: NGXY01000066.1 Klebsiella pneumoniae strain 27 547_15643_3190425_330______492_, whole genome shotgun sequence (15643 bp)
Overview 1 RT 1: 56-2619 bp Neighborhood of RT #1 [56, 2633] RVT-GII PRK10276 Feature: gene Location: 56-325 bp Feature: gene Location: 318-1802 bp Ori: OXP72270.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-1410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-1410 bp Feature: gene Location: 1802-2053 bp Feature: gene Location: 2208-2633 bp Ori: OXP72272.1 Feature: domain Description: PRK10276 Location: 2211-2619 bp Feature: domain Description: PRK10276 Location: 2211-2619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)