myRT

myRT report for GCA_002236115.1_ASM223611v1

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Seq: NIWT01000004.1 Pseudomonas jessenii strain DSM 17150 contig4, whole genome shotgun sequence (779324 bp)
Overview 1 RT 1: 300702-308591 bp Neighborhood of RT #1 [300702, 308644] PHP_HisPPase ABC_ATPase ABC_ATPase ABC_ATPase RVT-Retrons queA Feature: gene Location: 300702-303521 bp Feature: domain Description: PHP_HisPPase Location: 300873-301347 bp Feature: domain Description: PHP_HisPPase Location: 300873-301 347 bp Feature: domain Description: ABC_ATPase Location: 301641-303390 bp Feature: domain Description: ABC_ATPase Location: 301 641 -303390 bp Feature: gene Location: 304072-305412 bp Feature: domain Description: ABC_ATPase Location: 304126-304255 bp Feature: domain Description: ABC_ATPase Location: 3041 26-304255 bp Feature: domain Description: ABC_ATPase Location: 304621-304825 bp Feature: domain Description: ABC_ATPase Location: 304621 -304825 bp Feature: gene Location: 305414-306361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 305528-306077 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 305528-306077 bp Feature: gene Location: 306910-307239 bp Feature: gene Location: 307580-308644 bp Feature: domain Description: queA Location: 307583-308591 bp Feature: domain Description: queA Location: 307583-308591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase (cd07432), ABC_ATPase (pfam09818), RVT-Retrons, queA (TIGR00113)

Seq: NIWT01000002.1 Pseudomonas jessenii strain DSM 17150 contig2, whole genome shotgun sequence (960827 bp)
Overview 1 RT 1: 656910-660768 bp Neighborhood of RT #1 [656910, 660818] DDE_Tnp_IS66 RVT_N RVT-GII GIIM S_2TMBeta Feature: gene Location: 656910-657195 bp Feature: gene Location: 657230-657436 bp Feature: domain Description: DDE_Tnp_IS66 Location: 657239-657437 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6572 39-657437 bp Feature: gene Location: 658014-659690 bp Feature: RT Description: RVT_N Location: 658059-658302 bp Feature: RT Description: RVT_N Location: 658059-658302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 658347-658983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 658347-658983 bp Feature: domain Description: GIIM Note: maturase Location: 659040-659268 bp Feature: domain Description: GIIM Note: maturase Location: 659040-6592 68 bp Feature: gene Location: 659762-660005 bp Feature: gene Location: 660168-660818 bp Feature: domain Description: S_2TMBeta Location: 660246-660768 bp Feature: domain Description: S_2 TMBeta Location: 6602 46-660768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), S_2TMBeta (pfam18153)