myRT

myRT report for GCA_002236185.1_ASM223618v1

Download annotations/find similar RTs

Seq: NGXD01000139.1 Klebsiella pneumoniae strain 48 1119_21608_5219597_919__860_, whole genome shotgun sequence (21608 bp)
Overview 1 RT 1: 19206-21158 bp Neighborhood of RT #1 [19206, 21550] DinI RVT-GII Feature: gene Location: 19206-19448 bp Feature: domain Description: DinI Location: 19257-19437 bp Feature: domain Description: DinI Location: 1 9257-1 9437 bp Feature: gene Location: 19815-20066 bp Feature: gene Location: 20066-21550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20468-21158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20468-21 1 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII

Seq: NGXD01000115.1 Klebsiella pneumoniae strain 48 1093_4301_3089282_736__899__860_, whole genome shotgun sequence (4301 bp)
Overview 1 RT 1: 1036-4181 bp Neighborhood of RT #1 [1036, 4181] Antirestrict RVT-GII Feature: gene Location: 1036-1461 bp Feature: domain Description: Antirestrict Location: 1171-1459 bp Feature: domain Description: Antirestrict Location: 1171-1459 bp Feature: gene Location: 1982-2212 bp Feature: gene Location: 2446-3930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2848-3538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 848-3538 bp Feature: gene Location: 3930-4181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII

Seq: NGXD01000162.1 Klebsiella pneumoniae strain 48 1142_35034_9003524_992______860_, whole genome shotgun sequence (35034 bp)
Overview 1 RT 1: 31413-34914 bp Neighborhood of RT #1 [31413, 34914] umuC PRK10276 RVT-GII Feature: gene Location: 31413-32678 bp Feature: domain Description: umuC Location: 31416-32676 bp Feature: domain Description: umuC Location: 3 1416-3 2676 bp Feature: gene Location: 32681-33100 bp Feature: domain Description: PRK10276 Location: 32684-33095 bp Feature: domain Description: PRK10276 Location: 3 2684-3 3 095 bp Feature: gene Location: 33179-34663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33581-34271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 581-3 4271 bp Feature: gene Location: 34663-34914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NGXD01000130.1 Klebsiella pneumoniae strain 48 1109_6370_4653677_860__229__992_, whole genome shotgun sequence (6370 bp)
Overview 1 RT 1: 59-3228 bp Neighborhood of RT #1 [59, 3233] RVT-GII dacD Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 61-1151 bp Feature: gene Location: 1543-1794 bp Feature: gene Location: 2064-3233 bp Feature: domain Description: dacD Location: 2073-3228 bp Feature: domain Description: dacD Location: 2073-3228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII

Seq: NGXD01000054.1 Klebsiella pneumoniae strain 48 1025_3200_2773853_181______860_, whole genome shotgun sequence (3200 bp)
Overview 1 RT 1: 996-2750 bp Neighborhood of RT #1 [996, 3142] RVT-GII Feature: gene Location: 996-1205 bp Feature: gene Location: 1407-1658 bp Feature: gene Location: 1658-3142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2060-2750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2060-275 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NGXD01000119.1 Klebsiella pneumoniae strain 48 1098_4595_2831963_801__860_, whole genome shotgun sequence (4595 bp)
Overview 1 RT 1: 974-4475 bp Neighborhood of RT #1 [974, 4475] umuC PRK10276 RVT-GII Feature: gene Location: 974-2239 bp Feature: domain Description: umuC Location: 977-2237 bp Feature: domain Description: umuC Location: 977-2237 bp Feature: gene Location: 2241-2660 bp Feature: domain Description: PRK10276 Location: 2244-2655 bp Feature: domain Description: PRK10276 Location: 2244-26 55 bp Feature: gene Location: 2740-4224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3142-3832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3142-3832 bp Feature: gene Location: 4224-4475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, umuC (PRK03609)

Seq: NGXD01000129.1 Klebsiella pneumoniae strain 48 1108_10949_7211139_860__684__187_, whole genome shotgun sequence (10949 bp)
Overview 1 RT 1: 121-3763 bp Neighborhood of RT #1 [121, 3789] RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 121-372 bp Feature: gene Location: 372-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 7 4-1464 bp Feature: gene Location: 1955-2899 bp Feature: gene Location: 2911-3789 bp Feature: domain Description: Phage_CI_repr Location: 2938-3121 bp Feature: domain Description: Phage_CI_repr Location: 2938-3121 bp Feature: domain Description: Phage_CI_repr Location: 3250-3442 bp Feature: domain Description: Phage_CI_repr Location: 3250-3442 bp Feature: domain Description: Phage_CI_C Location: 3469-3763 bp Feature: domain Description: Phage_CI_C Location: 3469-37 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), RVT-GII

Seq: NGXD01000137.1 Klebsiella pneumoniae strain 48 1117_132091_24093704_892______860_, whole genome shotgun sequence (132091 bp)
Overview 1 RT 1: 129078-131641 bp Neighborhood of RT #1 [129078, 132033] int RVT-GII Feature: gene Location: 129078-130130 bp Feature: domain Description: int Location: 129081-130080 bp Feature: domain Description: int Location: 12908 1-13008 0 bp Feature: gene Location: 130298-130549 bp Feature: gene Location: 130549-132033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130951-131641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130951-131641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII

Seq: NGXD01000127.1 Klebsiella pneumoniae strain 48 1106_53217_11937453_860______397_, whole genome shotgun sequence (53217 bp)
Overview 1 RT 1: 121-2389 bp Neighborhood of RT #1 [121, 2490] RVT-GII PRK10276 PRK10276 Feature: gene Location: 121-372 bp Feature: gene Location: 372-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: gene Location: 1934-2173 bp Feature: gene Location: 2173-2490 bp Feature: domain Description: PRK10276 Location: 2179-2293 bp Feature: domain Description: PRK10276 Location: 2179 -229 3 bp Feature: domain Description: PRK10276 Location: 2320-2389 bp Feature: domain Description: PRK10276 Location: 2320-2389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NGXD01000079.1 Klebsiella pneumoniae strain 48 1052_14952_5127761_428______860_, whole genome shotgun sequence (14952 bp)
Overview 1 RT 1: 12579-14502 bp Neighborhood of RT #1 [12579, 14894] PRK10276 RVT-GII Feature: gene Location: 12579-13004 bp Feature: domain Description: PRK10276 Location: 12582-12990 bp Feature: domain Description: PRK10 276 Location: 12582-12990 bp Feature: gene Location: 13159-13410 bp Feature: gene Location: 13410-14894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13812-14502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13812-14502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NGXD01000128.1 Klebsiella pneumoniae strain 48 1107_20701_5447603_860__238_, whole genome shotgun sequence (20701 bp)
Overview 1 RT 1: 121-2400 bp Neighborhood of RT #1 [121, 2411] RVT-GII PRK10016 Feature: gene Location: 121-372 bp Feature: gene Location: 372-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: gene Location: 1802-2029 bp Feature: gene Location: 1938-2411 bp Feature: domain Description: PRK10016 Location: 1941-2400 bp Feature: domain Description: PRK10016 Location: 1941-2400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII

Seq: NGXD01000131.1 Klebsiella pneumoniae strain 48 1110_3849_3040292_860__722__683_, whole genome shotgun sequence (3849 bp)
Overview 1 RT 1: 59-2822 bp Neighborhood of RT #1 [59, 2863] RVT-GII XerC Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Feature: gene Location: 2441-2863 bp Feature: domain Description: XerC Location: 2477-2822 bp Feature: domain Description: XerC Location: 2477-2822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-GII