myRT

myRT report for GCA_002236945.1_ASM223694v1

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Seq: NHZG01000188.1 Bacillus thuringiensis strain HD133 scaffold188, whole genome shotgun sequence (1867 bp)
Overview 1 RT 1: 83-1166 bp Neighborhood of RT #1 [83, 1357] RVT-GII GIIM Feature: gene Location: 83-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-899 bp Feature: domain Description: GIIM Note: maturase Location: 959-1166 bp Feature: domain Description: GIIM Note: maturase Location: 959-1 1 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NHZG01000200.1 Bacillus thuringiensis strain HD133 scaffold200, whole genome shotgun sequence (1403 bp)
Overview 1 RT 1: 5-1307 bp Neighborhood of RT #1 [5, 1403] RVT-GII Intron_maturas2 Feature: gene Location: 5-1403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104-941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104-941 bp Feature: domain Description: Intron_maturas2 Location: 1079-1307 bp Feature: domain Description: Intron_maturas2 Location: 1079-1307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: NHZG01000177.1 Bacillus thuringiensis strain HD133 scaffold177, whole genome shotgun sequence (2614 bp)
Overview 1 RT 1: 718-2383 bp Neighborhood of RT #1 [718, 2508] RVT-GII HNHc Feature: gene Location: 718-2508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1015-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1015-1711 bp Feature: domain Description: HNHc Note: nucleases Location: 2251-2383 bp Feature: domain Description: HNHc Note: nucleases Location: 2251-23 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NHZG01000113.1 Bacillus thuringiensis strain HD133 scaffold113, whole genome shotgun sequence (11237 bp)
Overview 1 RT 1: 87-8355 bp Neighborhood of RT #1 [87, 8534] RVT-GII Intron_maturas2 HNHc RVT-GII GIIM TraG-D_C Ftsk_gamma rpsA Feature: gene Location: 87-356 bp Feature: gene Location: 948-2765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218-2040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218-204 0 bp Feature: domain Description: Intron_maturas2 Location: 2121-2415 bp Feature: domain Description: Intron_maturas2 Location: 2121-24 15 bp Feature: domain Description: HNHc Note: nucleases Location: 2562-2736 bp Feature: domain Description: HNHc Note: nucleases Location: 2562-2736 bp Feature: gene Location: 2866-3072 bp Feature: gene Location: 3744-5618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4044-4749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 04 4 -4 74 9 bp Feature: domain Description: GIIM Note: maturase Location: 4863-5031 bp Feature: domain Description: GIIM Note: maturase Location: 4 863-5031 bp Feature: gene Location: 5851-7293 bp Feature: domain Description: TraG-D_C Location: 5863-6181 bp Feature: domain Description: TraG-D_C Location: 5863-6181 bp Feature: domain Description: Ftsk_gamma Location: 6616-6775 bp Feature: domain Description: Ftsk_gamma Location: 6616-6775 bp Feature: gene Location: 7551-8534 bp Feature: domain Description: rpsA Location: 7818-8355 bp Feature: domain Description: rpsA Location: 7818-8355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NHZG01000045.1 Bacillus thuringiensis strain HD133 scaffold45, whole genome shotgun sequence (47893 bp)
Overview 1 RT 1: 8888-16117 bp Neighborhood of RT #1 [8888, 16117] KOG1000 KOG1000 RVT-GII GIIM Feature: gene Location: 8888-9601 bp Feature: gene Location: 9618-12023 bp Feature: domain Description: KOG1000 Location: 10329-10545 bp Feature: domain Description: KOG1000 Location: 10329-105 45 bp Feature: domain Description: KOG1000 Location: 11148-11481 bp Feature: domain Description: KOG1000 Location: 11148-11481 bp Feature: gene Location: 12298-14163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12598-13303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125 98-13303 bp Feature: domain Description: GIIM Note: maturase Location: 13390-13573 bp Feature: domain Description: GIIM Note: maturase Location: 13390-135 73 bp Feature: gene Location: 14943-15818 bp Feature: gene Location: 15890-16117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: NHZG01000179.1 Bacillus thuringiensis strain HD133 scaffold179, whole genome shotgun sequence (2536 bp)
Overview 1 RT 1: 1-2450 bp Neighborhood of RT #1 [1, 2450] RVT-GII GIIM Feature: gene Location: 1-1340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-1006 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1288 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1288 bp Feature: gene Location: 2013-2450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NHZG01000159.1 Bacillus thuringiensis strain HD133 scaffold159, whole genome shotgun sequence (4303 bp)
Overview 1 RT 1: 377-3996 bp Neighborhood of RT #1 [377, 3996] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 377-2251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 695-1526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 695-1526 bp Feature: domain Description: Intron_maturas2 Location: 1598-1916 bp Feature: domain Description: Intron_maturas2 Location: 1598-1916 bp Feature: domain Description: HNHc Note: nucleases Location: 2057-2222 bp Feature: domain Description: HNHc Note: nucleases Location: 2057 -2222 bp Feature: gene Location: 2851-3996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NHZG01000094.1 Bacillus thuringiensis strain HD133 scaffold94, whole genome shotgun sequence (18293 bp)
Overview 1 RT 1: 138-4481 bp Neighborhood of RT #1 [138, 4481] CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 138-455 bp Feature: domain Description: CwlT_like Location: 180-444 bp Feature: domain Description: CwlT_like Location: 18 0-444 bp Feature: gene Location: 1031-2854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1295-2129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1295-2129 bp Feature: domain Description: Intron_maturas2 Location: 2198-2537 bp Feature: domain Description: Intron_maturas2 Location: 2198 -2537 bp Feature: domain Description: HNHc Note: nucleases Location: 2675-2831 bp Feature: domain Description: HNHc Note: nucleases Location: 2675-28 31 bp Feature: gene Location: 3014-3889 bp Feature: domain Description: NlpD Location: 3029-3461 bp Feature: domain Description: NlpD Location: 3029-3461 bp Feature: domain Description: Spr Location: 3494-3830 bp Feature: domain Description: Spr Location: 3494-38 30 bp Feature: gene Location: 3906-4481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like

Seq: NHZG01000085.1 Bacillus thuringiensis strain HD133 scaffold85, whole genome shotgun sequence (20599 bp)
Overview 1 RT 1: 377-4273 bp Neighborhood of RT #1 [377, 4273] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 377-2200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 647-1475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 647-1475 bp Feature: domain Description: Intron_maturas2 Location: 1547-1865 bp Feature: domain Description: Intron_maturas2 Location: 1547-1865 bp Feature: domain Description: HNHc Note: nucleases Location: 2018-2171 bp Feature: domain Description: HNHc Note: nucleases Location: 2018-2171 bp Feature: gene Location: 2775-3869 bp Feature: gene Location: 3887-4273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NHZG01000090.1 Bacillus thuringiensis strain HD133 scaffold90, whole genome shotgun sequence (19242 bp)
Overview 1 RT 1: 10976-16756 bp Neighborhood of RT #1 [10976, 16756] DUF3854 LPD1 RVT-GII HNHc Feature: gene Location: 10976-12289 bp Feature: domain Description: DUF3854 Location: 11921-12260 bp Feature: domain Description: DUF3854 Location: 11921-12260 bp Feature: gene Location: 12279-13076 bp Feature: domain Description: LPD1 Location: 12825-13020 bp Feature: domain Description: LPD1 Location: 12825-13020 bp Feature: gene Location: 13148-14944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13442-14138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13442-14138 bp Feature: domain Description: HNHc Note: nucleases Location: 14738-14813 bp Feature: domain Description: HNHc Note: nucleases Location: 14738-14813 bp Feature: gene Location: 14976-15230 bp Feature: gene Location: 15665-16756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), LPD1 (pfam18796), RVT-GII, HNHc (smart00507)

Seq: NHZG01000075.1 Bacillus thuringiensis strain HD133 scaffold75, whole genome shotgun sequence (25574 bp)
Overview 1 RT 1: 985-10738 bp 2 RT 2: 16240-23031 bp Neighborhood of RT #1 [985, 10738] TrbL TraC-F-type RVT-GII HNHc TraC-F-type Neighborhood of RT #2 [16240, 23093] T_den_put_tspse DUF3854 RVT-GII HNHc LPD1 Feature: gene Location: 985-4989 bp Feature: domain Description: TrbL Location: 1471-1747 bp Feature: domain Description: TrbL Location: 1471-1747 bp Feature: gene Location: 5020-5988 bp Feature: domain Description: TraC-F-type Location: 5047-5827 bp Feature: domain Description: TraC-F-type Location: 5047-5827 bp Feature: gene Location: 6280-8112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6580-7285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6580-7285 bp Feature: domain Description: HNHc Note: nucleases Location: 7864-7996 bp Feature: domain Description: HNHc Note: nucleases Location: 7864-7996 bp Feature: gene Location: 8841-9821 bp Feature: domain Description: TraC-F-type Location: 9270-9744 bp Feature: domain Description: TraC-F-type Location: 9270-9744 bp Feature: gene Location: 9824-10738 bp Feature: gene Location: 16240-17163 bp Feature: domain Description: T_den_put_tspse Location: 16282-17146 bp Feature: domain Description: T_den_put_tspse Location: 16282-17146 bp Feature: gene Location: 17275-17769 bp Feature: domain Description: DUF3854 Location: 17386-17740 bp Feature: domain Description: DUF3854 Location: 17386-17740 bp Feature: gene Location: 17893-19725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18205-18904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18205-18904 bp Feature: domain Description: HNHc Note: nucleases Location: 19444-19609 bp Feature: domain Description: HNHc Note: nucleases Location: 19444-19609 bp Feature: gene Location: 20498-21328 bp Feature: gene Location: 21318-23093 bp Feature: domain Description: LPD1 Location: 22842-23031 bp Feature: domain Description: LPD1 Location: 22842-23031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507), TrbL (pfam04610), T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), LPD1 (pfam18796)

Seq: NHZG01000058.1 Bacillus thuringiensis strain HD133 scaffold58, whole genome shotgun sequence (39758 bp)
Overview 1 RT 1: 11171-15777 bp Neighborhood of RT #1 [11171, 15824] RVT-GII HNHc PRK03113 Feature: gene Location: 11171-11371 bp Feature: gene Location: 11447-11683 bp Feature: gene Location: 12469-14376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12769-13480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 769-13480 bp Feature: domain Description: HNHc Note: nucleases Location: 14071-14221 bp Feature: domain Description: HNHc Note: nucleases Location: 14071-14221 bp Feature: gene Location: 14598-15353 bp Feature: gene Location: 15387-15824 bp Feature: domain Description: PRK03113 Location: 15405-15777 bp Feature: domain Description: PRK03113 Location: 15405-15777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK03113 (putative disulfide oxidoreductase; Provisional)

Seq: NHZG01000174.1 Bacillus thuringiensis strain HD133 scaffold174, whole genome shotgun sequence (2722 bp)
Overview 1 RT 1: 1-2501 bp Neighborhood of RT #1 [1, 2617] CwlT_like RVT-GII HNHc Feature: gene Location: 1-138 bp Feature: domain Description: CwlT_like Location: 4-115 bp Feature: domain Description: CwlT_like Location: 4-115 bp Feature: gene Location: 812-2617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1106-1802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1106-1802 bp Feature: domain Description: HNHc Note: nucleases Location: 2363-2501 bp Feature: domain Description: HNHc Note: nucleases Location: 2363-2501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507)