myRT

myRT report for GCA_002237635.1_ACETO_MES1

Download annotations/find similar RTs

Seq: MJUY01000020.1 Acetobacterium sp. MES1 NODE_25_length_46310_cov_43.7042_ID_49, whole genome shotgun sequence (46310 bp)
Overview 1 RT 1: 17180-24659 bp Neighborhood of RT #1 [17180, 24706] FadB PRK05809 PRK05809 RVT-GII GIIM RocR GcvT GcvT Feature: gene Location: 17180-18034 bp Ori: OXS26183.1 Feature: domain Description: FadB Location: 17186-18032 bp Feature: domain Description: FadB Location: 1 71 86-1 8032 bp Feature: gene Location: 18062-18982 bp Ori: OXS26184.1 Feature: domain Description: PRK05809 Location: 18065-18653 bp Feature: domain Description: PRK05809 Location: 1 8065-1 8653 bp Feature: domain Description: PRK05809 Location: 18734-18977 bp Feature: domain Description: PRK05809 Location: 1 8734-1 8977 bp Feature: gene Location: 19780-21195 bp Ori: OXS26185.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20134-20749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 34-20749 bp Feature: domain Description: GIIM Note: maturase Location: 20803-21022 bp Feature: domain Description: GIIM Note: maturase Location: 20803-21 022 bp Feature: gene Location: 21667-23121 bp Ori: OXS26186.1 Feature: domain Description: RocR Location: 21742-23110 bp Feature: domain Description: RocR Location: 21 742-231 1 0 bp Feature: gene Location: 23372-24706 bp Ori: OXS26187.1 Feature: domain Description: GcvT Location: 23447-24032 bp Feature: domain Description: GcvT Location: 23447-24032 bp Feature: domain Description: GcvT Location: 24215-24659 bp Feature: domain Description: GcvT Location: 2421 5-24659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FadB (TIGR02437), PRK05809 (short-chain-enoyl-CoA hydratase), RVT-GII, GIIM (pfam08388), RocR (COG3829), GcvT (COG0404)

Seq: MJUY01000057.1 Acetobacterium sp. MES1 NODE_7_length_139432_cov_60.4456_ID_13, whole genome shotgun sequence (139432 bp)
Overview 1 RT 1: 39934-45720 bp Neighborhood of RT #1 [39934, 45720] PRK13357 TIR-like RVT-UG2 STE14 Feature: gene Location: 39934-40995 bp Ori: OXS24604.1 Feature: domain Description: PRK13357 Location: 39952-40993 bp Feature: domain Description: PRK13357 Location: 39952 -40993 bp Feature: gene Location: 41986-42438 bp Ori: OXS24687.1 Feature: domain Description: TIR-like Location: 42007-42358 bp Feature: domain Description: TIR-like Location: 42 007-42 358 bp Feature: gene Location: 42974-44299 bp Ori: OXS24688.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 43166-44012 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 43166-44012 bp Feature: gene Location: 44624-45277 bp Ori: OXS24605.1 Feature: domain Description: STE14 Location: 44759-45275 bp Feature: domain Description: STE14 Location: 44759-452 75 bp Feature: gene Location: 45274-45720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13357 (branched-chain amino acid aminotransferase; Provisional), TIR-like (pfam10137), RVT-UG2, STE14 (COG2020)

Seq: MJUY01000013.1 Acetobacterium sp. MES1 NODE_1_length_440318_cov_68.6285_ID_1, whole genome shotgun sequence (440318 bp)
Overview 1 RT 1: 117113-128623 bp Neighborhood of RT #1 [117113, 128643] MntR rumA RVT-GII GIIM Recombinase Recombinase Resolvase Recombinase RVT-GII GIIM HsdR HsdM Feature: gene Location: 117113-117487 bp Ori: OXS26559.1 Feature: domain Description: MntR Location: 117122-117482 bp Feature: domain Description: MntR Location: 117122-117482 bp Feature: gene Location: 117514-118893 bp Ori: OXS26560.1 Feature: domain Description: rumA Location: 117580-118849 bp Feature: domain Description: rumA Location: 117580-118849 bp Feature: gene Location: 119372-120670 bp Ori: OXS26561.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119672-120311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119672-1203 11 bp Feature: domain Description: GIIM Note: maturase Location: 120389-120623 bp Feature: domain Description: GIIM Note: maturase Location: 1203 89-120623 bp Feature: gene Location: 121078-121392 bp Ori: OXS26562.1 Feature: domain Description: Recombinase Location: 121099-121261 bp Feature: domain Description: Recombinase Location: 121099-121261 bp Feature: domain Description: Recombinase Location: 121267-121312 bp Feature: domain Description: Recombinase Location: 121267-1213 12 bp Feature: gene Location: 121370-122299 bp Ori: OXS26563.1 Feature: domain Description: Resolvase Location: 121439-121880 bp Feature: domain Description: Resolvase Location: 12143 9-121880 bp Feature: domain Description: Recombinase Location: 121949-122234 bp Feature: domain Description: Recombinase Location: 121949-12223 4 bp Feature: gene Location: 123008-124306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123308-123947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 3 08-123 947 bp Feature: domain Description: GIIM Note: maturase Location: 124025-124259 bp Feature: domain Description: GIIM Note: maturase Location: 124025-124259 bp Feature: gene Location: 124781-127150 bp Ori: OXS26564.1 Feature: domain Description: HsdR Location: 124790-127139 bp Feature: domain Description: HsdR Location: 124790-12713 9 bp Feature: gene Location: 127174-128643 bp Ori: OXS26565.1 Feature: domain Description: HsdM Location: 127189-128623 bp Feature: domain Description: HsdM Location: 127189-128623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MntR (COG1321), rumA (TIGR00479), RVT-GII, GIIM (pfam08388), Recombinase (pfam07508), Resolvase (smart00857), HsdR (COG4096), HsdM (COG0286)