myRT

myRT report for GCA_002238145.1_ASM223814v1

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Seq: NDFN01000058.1 Bacillus sp. OG2 NODE_59_length_1894_cov_1.50517, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 1-1045 bp Neighborhood of RT #1 [1, 1213] retropepsin_like RVT-UNC Feature: gene Location: 1-1213 bp Ori: OXT14609.1 Feature: domain Description: retropepsin_like Location: 46-310 bp Feature: domain Description: retropepsin_like Location: 46-31 0 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 919-1045 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 91 9-1 045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG26/RVT-UG13/RVT-UG20/RVT-UG8(RVT-UNC)

Seq: NDFN01000026.1 Bacillus sp. OG2 NODE_26_length_54247_cov_80.2399, whole genome shotgun sequence (54247 bp)
Overview 1 RT 1: 14241-18893 bp Neighborhood of RT #1 [14241, 18893] AbrB Spr RVT-GII Intron_maturas2 HNHc Feature: gene Location: 14241-14516 bp Ori: OXT15215.1 Feature: domain Description: AbrB Location: 14244-14499 bp Feature: domain Description: AbrB Location: 142 44-14499 bp Feature: gene Location: 14557-15063 bp Ori: OXT15243.1 Feature: domain Description: Spr Location: 14680-15046 bp Feature: domain Description: Spr Location: 14680-15046 bp Feature: gene Location: 15390-17213 bp Ori: OXT15216.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15654-16485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15654-16485 bp Feature: domain Description: Intron_maturas2 Location: 16641-16992 bp Feature: domain Description: Intron_maturas2 Location: 16641-16992 bp Feature: domain Description: HNHc Note: nucleases Location: 17010-17184 bp Feature: domain Description: HNHc Note: nucleases Location: 17010-17184 bp Feature: gene Location: 17798-18277 bp Feature: gene Location: 18264-18893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbrB (pfam05145), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NDFN01000051.1 Bacillus sp. OG2 NODE_52_length_4919_cov_2.74322, whole genome shotgun sequence (4919 bp)
Overview 1 RT 1: 1-4919 bp Neighborhood of RT #1 [1, 4919] L1-EN RVT-UNC Feature: gene Location: 1-212 bp Feature: gene Location: 254-721 bp Feature: gene Location: 714-4622 bp Ori: OXT14627.1 Feature: domain Description: L1-EN Location: 744-1431 bp Feature: domain Description: L1-EN Location: 744-143 1 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2202-2922 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2202-2922 bp Feature: gene Location: 4713-4919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-DGRs/RVT-CRISPR(RVT-UNC)

Seq: NDFN01000002.1 Bacillus sp. OG2 NODE_2_length_408147_cov_26.5661, whole genome shotgun sequence (408147 bp)
Overview 1 RT 1: 162645-167824 bp Neighborhood of RT #1 [162645, 167859] PRK01844 SirA RVT-GII GIIM TktA DUF896 Feature: gene Location: 162645-162860 bp Ori: OXT18542.1 Feature: domain Description: PRK01844 Location: 162648-162852 bp Feature: domain Description: PRK0184 4 Location: 16264 8-162852 bp Feature: gene Location: 162947-163384 bp Ori: OXT18543.1 Feature: domain Description: SirA Location: 162953-163367 bp Feature: domain Description: SirA Location: 162953-163367 bp Feature: gene Location: 163627-164901 bp Ori: OXT18544.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163828-164443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163828-164 4 4 3 bp Feature: domain Description: GIIM Note: maturase Location: 164503-164710 bp Feature: domain Description: GIIM Note: maturase Location: 164 503-164 710 bp Feature: gene Location: 165440-167440 bp Ori: OXT18545.1 Feature: domain Description: TktA Location: 165449-167435 bp Feature: domain Description: TktA Location: 1654 4 9-1674 35 bp Feature: gene Location: 167620-167859 bp Ori: OXT18546.1 Feature: domain Description: DUF896 Location: 167638-167824 bp Feature: domain Description: DUF896 Location: 167638-167824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01844 (YneF family protein), SirA (pfam10747), RVT-GII, GIIM (pfam08388), TktA (COG0021), DUF896 (pfam05979)

Seq: NDFN01000059.1 Bacillus sp. OG2 NODE_60_length_1864_cov_58.6622, whole genome shotgun sequence (1864 bp)
Overview 1 RT 1: 529-1639 bp Neighborhood of RT #1 [529, 1785] RVT-GII GIIM Feature: gene Location: 529-1785 bp Ori: OXT14608.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-135 7 bp Feature: domain Description: GIIM Note: maturase Location: 1408-1639 bp Feature: domain Description: GIIM Note: maturase Location: 1408-1639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NDFN01000050.1 Bacillus sp. OG2 NODE_50_length_6624_cov_2.33491, whole genome shotgun sequence (6624 bp)
Overview 1 RT 1: 2335-4678 bp Neighborhood of RT #1 [2335, 6354] L1-EN RVT-CRISPR-like Feature: gene Location: 2335-6354 bp Ori: OXT14629.1 Feature: domain Description: L1-EN Location: 2365-3049 bp Feature: domain Description: L1-EN Location: 236 5-3049 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3820-4678 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3820-46 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR