myRT

myRT report for GCA_002238605.1_ASM223860v1

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Seq: MPMR01000015.1 BD2-11 clade cluster bacterium bin43 NODE_464_length_86272_cov_18.4351_ID_927, whole genome shotgun sequence (86272 bp)
Overview 1 RT 1: 22424-27287 bp Neighborhood of RT #1 [22424, 27292] RVT-GII GIIM COG4584 PRK09183 Feature: gene Location: 22424-23236 bp Feature: gene Location: 23416-24063 bp Feature: gene Location: 24694-25311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24697-24931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24697-24931 bp Feature: domain Description: GIIM Note: maturase Location: 25003-25225 bp Feature: domain Description: GIIM Note: maturase Location: 25003-25225 bp Feature: gene Location: 25736-26692 bp Feature: domain Description: COG4584 Location: 25739-26369 bp Feature: domain Description: COG4584 Location: 25739-26369 bp Feature: gene Location: 26825-27292 bp Feature: domain Description: PRK09183 Location: 26894-27287 bp Feature: domain Description: PRK091 83 Location: 26894-27287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional)

Seq: MPMR01000061.1 BD2-11 clade cluster bacterium bin43 NODE_9420_length_5280_cov_17.5057_ID_18839, whole genome shotgun sequence (5280 bp)
Overview 1 RT 1: 1033-5267 bp Neighborhood of RT #1 [1033, 5278] PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII GIIM group_II_RT_mat Feature: gene Location: 1033-3243 bp Feature: domain Description: PinE Location: 1075-1654 bp Feature: domain Description: PinE Location: 1075-1654 bp Feature: domain Description: Zn_ribbon_recom Location: 2026-2200 bp Feature: domain Description: Zn_ribbon_recom Location: 2 02 6-2 2 00 bp Feature: domain Description: HTH_17 Location: 2908-3025 bp Feature: domain Description: HTH_17 Location: 2 908-302 5 bp Feature: domain Description: HTH_17 Location: 3091-3202 bp Feature: domain Description: HTH_17 Location: 3091-32 02 bp Feature: gene Location: 3396-3587 bp Feature: gene Location: 3812-4552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3815-4175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3815-4175 bp Feature: domain Description: GIIM Note: maturase Location: 4247-4442 bp Feature: domain Description: GIIM Note: maturase Location: 42 47-4442 bp Feature: gene Location: 4574-4756 bp Feature: gene Location: 4784-5278 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5084-5267 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5084-52 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)