myRT

myRT report for GCA_002238805.1_ASM223880v1

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Seq: MPNB01000166.1 Rhodothermaceae bacterium bin80 NODE_12363_length_3509_cov_13.7129_ID_24725, whole genome shotgun sequence (3509 bp)
Overview 1 RT 1: 275-1514 bp Neighborhood of RT #1 [275, 1514] RVT-GII Feature: gene Location: 275-952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290-548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290-548 bp Feature: gene Location: 1135-1323 bp Feature: gene Location: 1359-1514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MPNB01000023.1 Rhodothermaceae bacterium bin80 NODE_1358_length_45603_cov_20.0424_ID_2715, whole genome shotgun sequence (45603 bp)
Overview 1 RT 1: 33831-36840 bp Neighborhood of RT #1 [33831, 36840] PRK09289 eubact_ribD RVT-GII DDE_Tnp_IS1595 Feature: gene Location: 33831-34421 bp Feature: domain Description: PRK09289 Location: 33834-34410 bp Feature: domain Description: PRK092 89 Location: 33834-34410 bp Feature: gene Location: 34429-35562 bp Feature: domain Description: eubact_ribD Location: 34459-35533 bp Feature: domain Description: eubact_ribD Location: 34459-35533 bp Feature: gene Location: 35826-36218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35874-36210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35874-362 10 bp Feature: gene Location: 36444-36683 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 36450-36570 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 36450-36570 bp Feature: gene Location: 36688-36840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09289 (riboflavin synthase), eubact_ribD (TIGR00326), RVT-GII, DDE_Tnp_IS1595 (pfam12762)

Seq: MPNB01000187.1 Rhodothermaceae bacterium bin80 NODE_19683_length_1828_cov_19.6126_ID_39365, whole genome shotgun sequence (1828 bp)
Overview 1 RT 1: 2-1731 bp Neighborhood of RT #1 [2, 1826] RVT-GII GIIM Feature: gene Location: 2-133 bp Feature: gene Location: 247-432 bp Feature: gene Location: 516-1826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1419 bp Feature: domain Description: GIIM Note: maturase Location: 1500-1731 bp Feature: domain Description: GIIM Note: maturase Location: 1500-173 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MPNB01000188.1 Rhodothermaceae bacterium bin80 NODE_21003_length_1671_cov_9.87565_ID_42005, whole genome shotgun sequence (1671 bp)
Overview 1 RT 1: 2-1560 bp Neighborhood of RT #1 [2, 1670] RVT-GII DDE_Tnp_1_4 Feature: gene Location: 2-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119-278 bp Feature: gene Location: 501-1670 bp Feature: domain Description: DDE_Tnp_1_4 Location: 573-1560 bp Feature: domain Description: DDE_Tnp_1_4 Location: 573-1560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1_4 (pfam13701)

Seq: MPNB01000080.1 Rhodothermaceae bacterium bin80 NODE_3659_length_19655_cov_20.591_ID_7317, whole genome shotgun sequence (19655 bp)
Overview 1 RT 1: 3-2611 bp Neighborhood of RT #1 [3, 2718] RVT-GII GIIM PIN Feature: gene Location: 3-131 bp Feature: gene Location: 426-1766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 726-1386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 726-1386 bp Feature: domain Description: GIIM Note: maturase Location: 1461-1668 bp Feature: domain Description: GIIM Note: maturase Location: 1461-1668 bp Feature: gene Location: 1824-2108 bp Feature: gene Location: 2278-2718 bp Feature: domain Description: PIN Location: 2290-2611 bp Feature: domain Description: PIN Location: 2290-2611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PIN (pfam01850)

Seq: MPNB01000005.1 Rhodothermaceae bacterium bin80 NODE_443_length_89026_cov_19.8171_ID_885, whole genome shotgun sequence (89026 bp)
Overview 1 RT 1: 31920-42605 bp Neighborhood of RT #1 [31920, 42649] LMWP_ArsC dnaE PRK07773 intein_Cterm dnaE RVT-GII uvrA Feature: gene Location: 31920-32339 bp Feature: domain Description: LMWP_ArsC Location: 31935-32322 bp Feature: domain Description: LMWP_ArsC Location: 31935-32322 bp Feature: gene Location: 32345-36286 bp Feature: domain Description: dnaE Location: 32354-34589 bp Feature: domain Description: dnaE Location: 32354-34589 bp Feature: domain Description: PRK07773 Location: 34589-34874 bp Feature: domain Description: PRK07773 Location: 34589-34874 bp Feature: domain Description: intein_Cterm Location: 34997-35057 bp Feature: domain Description: intein_Cterm Location: 34997-35057 bp Feature: domain Description: dnaE Location: 35057-36233 bp Feature: domain Description: dnaE Location: 35057-36 233 bp Feature: gene Location: 37308-38801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37701-38397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37701-38397 bp Feature: gene Location: 39418-39699 bp Feature: gene Location: 39773-42649 bp Feature: domain Description: uvrA Location: 39806-42605 bp Feature: domain Description: uvrA Location: 39806 -426 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LMWP_ArsC (cd16345), dnaE (PRK07374), PRK07773 (replicative DNA helicase; Validated), intein_Cterm (TIGR01443), RVT-GII, uvrA (PRK00349)

Seq: MPNB01000006.1 Rhodothermaceae bacterium bin80 NODE_503_length_82064_cov_19.6039_ID_1005, whole genome shotgun sequence (82064 bp)
Overview 1 RT 1: 6567-12936 bp Neighborhood of RT #1 [6567, 13034] RVT-UG1 HipB ImmA Feature: gene Location: 6567-7040 bp Feature: gene Location: 6947-7222 bp Feature: gene Location: 7662-11414 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 8256-8754 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 8256-87 54 bp Feature: gene Location: 11374-11622 bp Feature: gene Location: 11886-13034 bp Feature: domain Description: HipB Location: 11916-12144 bp Feature: domain Description: HipB Location: 11916-12144 bp Feature: domain Description: ImmA Location: 12462-12936 bp Feature: domain Description: ImmA Location: 12462-12936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, HipB (COG1396), ImmA (COG2856)

Seq: MPNB01000107.1 Rhodothermaceae bacterium bin80 NODE_5698_length_12308_cov_18.2965_ID_11395, whole genome shotgun sequence (12308 bp)
Overview 1 RT 1: 83-2472 bp Neighborhood of RT #1 [83, 2472] RVT-GII GIIM RVT-GII AAA_16 Feature: gene Location: 83-778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 9-344 bp Feature: domain Description: GIIM Note: maturase Location: 398-623 bp Feature: domain Description: GIIM Note: maturase Location: 398 -623 bp Feature: gene Location: 782-937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788-929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78 8 -929 bp Feature: gene Location: 1000-2427 bp Feature: domain Description: AAA_16 Location: 1294-1684 bp Feature: domain Description: AAA_16 Location: 1294-168 4 bp Feature: gene Location: 2302-2472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AAA_16 (pfam13191)

Seq: MPNB01000112.1 Rhodothermaceae bacterium bin80 NODE_6102_length_10754_cov_21.1898_ID_12203, whole genome shotgun sequence (10754 bp)
Overview 1 RT 1: 4047-9001 bp Neighborhood of RT #1 [4047, 9021] NHL RVT-GII GIIM PRK12608 Feature: gene Location: 4047-4478 bp Feature: gene Location: 4639-5808 bp Feature: domain Description: NHL Location: 4813-5095 bp Feature: domain Description: NHL Location: 4813-509 5 bp Feature: gene Location: 6043-7383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6343-7003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6343-7003 bp Feature: domain Description: GIIM Note: maturase Location: 7078-7285 bp Feature: domain Description: GIIM Note: maturase Location: 7078-7285 bp Feature: gene Location: 7441-7725 bp Feature: gene Location: 7888-9021 bp Feature: domain Description: PRK12608 Location: 7903-9001 bp Feature: domain Description: PRK12608 Location: 79 03-9 001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHL (pfam01436), RVT-GII, GIIM (pfam08388), PRK12608 (transcription termination factor Rho; Provisional)

Seq: MPNB01000121.1 Rhodothermaceae bacterium bin80 NODE_7150_length_8127_cov_13.8025_ID_14299, whole genome shotgun sequence (8127 bp)
Overview 1 RT 1: 2-2173 bp Neighborhood of RT #1 [2, 2877] RVT-GII COG4584 Feature: gene Location: 2-649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-650 bp Feature: gene Location: 651-962 bp Feature: gene Location: 1303-2877 bp Feature: domain Description: COG4584 Location: 1396-2173 bp Feature: domain Description: COG4584 Location: 1396-2173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG4584 (Transposase )

Seq: MPNB01000132.1 Rhodothermaceae bacterium bin80 NODE_7971_length_6844_cov_17.0199_ID_15941, whole genome shotgun sequence (6844 bp)
Overview 1 RT 1: 3998-6638 bp Neighborhood of RT #1 [3998, 6638] ImmA RVT-GII Feature: gene Location: 3998-4507 bp Feature: domain Description: ImmA Location: 4106-4499 bp Feature: domain Description: ImmA Location: 4106-4499 bp Feature: gene Location: 4611-4943 bp Feature: gene Location: 5123-5692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5126-5582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5126-5582 bp Feature: gene Location: 5807-6031 bp Feature: gene Location: 6444-6638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ImmA (COG2856), RVT-GII

Seq: MPNB01000135.1 Rhodothermaceae bacterium bin80 NODE_8033_length_6765_cov_18.3926_ID_16065, whole genome shotgun sequence (6765 bp)
Overview 1 RT 1: 3049-6764 bp Neighborhood of RT #1 [3049, 6763] PHA02518 RVT-GII GIIM recJ recJ Feature: gene Location: 3049-3465 bp Feature: domain Description: PHA02518 Location: 3055-3406 bp Feature: domain Description: PHA02518 Location: 3055-3406 bp Feature: gene Location: 3715-3969 bp Feature: gene Location: 4002-5342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4302-4962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4302-4962 bp Feature: domain Description: GIIM Note: maturase Location: 5034-5244 bp Feature: domain Description: GIIM Note: maturase Location: 5034-5244 bp Feature: gene Location: 5686-6492 bp Feature: domain Description: recJ Location: 5761-6442 bp Feature: domain Description: recJ Location: 5761-6442 bp Feature: gene Location: 6524-6763 bp Feature: domain Description: recJ Location: 6530-6764 bp Feature: domain Description: recJ Location: 6530-6764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02518 (ParA-like protein; Provisional), RVT-GII, GIIM (pfam08388), recJ (TIGR00644)

Seq: MPNB01000148.1 Rhodothermaceae bacterium bin80 NODE_9377_length_5317_cov_18.7487_ID_18753, whole genome shotgun sequence (5317 bp)
Overview 1 RT 1: 268-5316 bp Neighborhood of RT #1 [268, 5316] RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 268-399 bp Feature: gene Location: 695-2083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1703-1928 bp Feature: domain Description: GIIM Note: maturase Location: 1703-1928 bp Feature: gene Location: 2096-2479 bp Feature: gene Location: 2674-2922 bp Feature: gene Location: 3057-4559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3459-4155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3459-4155 bp Feature: domain Description: GIIM Note: maturase Location: 4221-4440 bp Feature: domain Description: GIIM Note: maturase Location: 4221-4440 bp Feature: gene Location: 4561-4872 bp Feature: gene Location: 5188-5316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)