myRT

myRT report for GCA_002238885.1_ASM223888v1

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Seq: MPNF01000461.1 Alphaproteobacteria bacterium bin95 NODE_14181_length_2871_cov_7.54082_ID_28361, whole genome shotgun sequence (2871 bp)
Overview 1 RT 1: 2-2871 bp Neighborhood of RT #1 [2, 2870] RVT-GII GIIM PinE HicB Feature: gene Location: 2-1432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 344-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 344-1 037 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 2-1 322 bp Feature: gene Location: 1491-2069 bp Feature: domain Description: PinE Location: 1506-2061 bp Feature: domain Description: PinE Location: 1 506-2061 bp Feature: gene Location: 2694-2870 bp Feature: domain Description: HicB Location: 2706-2871 bp Feature: domain Description: HicB Location: 2706-2871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), HicB (pfam05534)

Seq: MPNF01000135.1 Alphaproteobacteria bacterium bin95 NODE_7510_length_7516_cov_8.40222_ID_15019, whole genome shotgun sequence (7516 bp)
Overview 1 RT 1: 408-4577 bp Neighborhood of RT #1 [408, 4577] RVT-GII GIIM COG5421 COG5421 Feature: gene Location: 408-1838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1461 bp Feature: domain Description: GIIM Note: maturase Location: 1530-1740 bp Feature: domain Description: GIIM Note: maturase Location: 1530-1740 bp Feature: gene Location: 2254-3888 bp Feature: domain Description: COG5421 Location: 2794-3382 bp Feature: domain Description: COG542 1 Location: 2 794-3382 bp Feature: domain Description: COG5421 Location: 3517-3694 bp Feature: domain Description: COG542 1 Location: 3517-3694 bp Feature: gene Location: 4008-4577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-GII, GIIM (pfam08388)