myRT

myRT report for GCA_002239285.1_ASM223928v1

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Seq: MVFK01000010.1 Streptococcus agalactiae strain S13-129 S13-129_Contig4, whole genome shotgun sequence (187910 bp)
Overview 1 RT 1: 179488-187768 bp Neighborhood of RT #1 [179488, 187806] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 179488-180039 bp Feature: gene Location: 180089-185530 bp Feature: domain Description: N6_Mtase Location: 182081-182672 bp Feature: domain Description: N6_Mtase Location: 1 82081 -1 82672 bp Feature: domain Description: COG4646 Location: 183266-185387 bp Feature: domain Description: COG4646 Location: 1 83266-1 85387 bp Feature: gene Location: 186028-187806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186289-187081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 86289-1 87081 bp Feature: domain Description: Intron_maturas2 Location: 187186-187417 bp Feature: domain Description: Intron_maturas2 Location: 1 871 86-1 8741 7 bp Feature: domain Description: HNHc Note: nucleases Location: 187582-187768 bp Feature: domain Description: HNHc Note: nucleases Location: 1 87582-1 87768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MVFK01000026.1 Streptococcus agalactiae strain S13-129 S13-129_Contig2, whole genome shotgun sequence (222096 bp)
Overview 1 RT 1: 102472-105721 bp Neighborhood of RT #1 [102472, 105721] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 102472-102831 bp Feature: domain Description: HTH_XRE Location: 102496-102658 bp Feature: domain Description: HTH_XRE Location: 102 496-102 658 bp Feature: gene Location: 102816-103076 bp Feature: gene Location: 103209-104528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103509-104142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103509-104142 bp Feature: domain Description: GIIM Note: maturase Location: 104211-104433 bp Feature: domain Description: GIIM Note: maturase Location: 1042 11-104433 bp Feature: gene Location: 105109-105525 bp Feature: domain Description: PRK07275 Location: 105112-105448 bp Feature: domain Description: PRK072 75 Location: 105112 -105448 bp Feature: domain Description: PRK07275 Location: 105475-105523 bp Feature: domain Description: PRK072 75 Location: 105475-10552 3 bp Feature: gene Location: 105515-105721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)