myRT

myRT report for GCA_002239535.1_ASM223953v1

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Seq: NLBC01000045.1 Pseudomonas aeruginosa strain Env_16 contig-65, whole genome shotgun sequence (256215 bp)
Overview 1 RT 1: 94844-100569 bp Neighborhood of RT #1 [94844, 100595] YycJ-like_MBL-fold PRK09362 RVT-G2L4 PinE COG4916 Feature: gene Location: 94844-95602 bp Ori: OXT86715.1 Feature: domain Description: YycJ-like_MBL-fold Location: 94859-95402 bp Feature: domain Description: YycJ-like_MBL-fold Location: 94859-95402 bp Feature: gene Location: 95631-96341 bp Ori: OXT86716.1 Feature: domain Description: PRK09362 Location: 95634-96330 bp Feature: domain Description: PRK09362 Location: 95634-96330 bp Feature: gene Location: 97406-98653 bp Ori: OXT86717.1 Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 97619-98213 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 9761 9-9821 3 bp Feature: gene Location: 98819-99400 bp Ori: OXT86718.1 Feature: domain Description: PinE Location: 98822-99353 bp Feature: domain Description: PinE Location: 98822-99353 bp Feature: gene Location: 99684-100595 bp Ori: OXT86719.1 Feature: domain Description: COG4916 Location: 100032-100569 bp Feature: domain Description: COG491 6 Location: 1 00032-1 00569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YycJ-like_MBL-fold (cd07733), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), RVT-G2L4, PinE (COG1961), COG4916 (Uncharacterized protein )

Seq: NLBC01000052.1 Pseudomonas aeruginosa strain Env_16 contig-1000071, whole genome shotgun sequence (65550 bp)
Overview 1 RT 1: 57764-63471 bp Neighborhood of RT #1 [57764, 63509] DUF2845 RVT-Retrons COG2452 Feature: gene Location: 57764-58057 bp Ori: OXT84779.1 Feature: domain Description: DUF2845 Location: 57821-58043 bp Feature: domain Description: DUF2 845 Location: 5782 1-58043 bp Feature: gene Location: 58289-58765 bp Feature: gene Location: 60167-61201 bp Ori: OXT84771.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60395-60935 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60395-60935 bp Feature: gene Location: 62907-63176 bp Feature: gene Location: 63294-63509 bp Ori: OXT84773.1 Feature: domain Description: COG2452 Location: 63354-63471 bp Feature: domain Description: COG2 452 Location: 63354-63471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2845 (pfam11006), RVT-Retrons, COG2452 (Predicted site-specific integrase-resolvase )