myRT

myRT report for GCA_002240955.1_ASM224095v1

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Seq: NIHG01000030.1 Escherichia coli strain ICBEc09 contig_30_64_15, whole genome shotgun sequence (140342 bp)
Overview 1 RT 1: 25554-31585 bp Neighborhood of RT #1 [25554, 31722] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 25554-25694 bp Ori: OXV18403.1 Feature: domain Description: SfsB Location: 25563-25635 bp Feature: domain Description: SfsB Location: 25563-25635 bp Feature: gene Location: 25691-26161 bp Feature: gene Location: 26508-29717 bp Ori: OXV18405.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27036-27525 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27036-27525 bp Feature: domain Description: nitrilase Location: 29031-29628 bp Feature: domain Description: nitrilase Location: 29031 -29628 bp Feature: gene Location: 30012-30815 bp Ori: OXV18406.1 Feature: domain Description: AbiEi_3_N Location: 30045-30306 bp Feature: domain Description: AbiEi_3_N Location: 30045-30306 bp Feature: domain Description: AbiEi_3 Location: 30318-30774 bp Feature: domain Description: AbiEi_3 Location: 3031 8-30774 bp Feature: gene Location: 30802-31722 bp Ori: OXV18407.1 Feature: domain Description: AbiEii Location: 30844-31585 bp Feature: domain Description: AbiEii Location: 30844-31 585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: NIHG01000034.1 Escherichia coli strain ICBEc09 contig_34_64_53, whole genome shotgun sequence (252154 bp)
Overview 1 RT 1: 175327-179643 bp Neighborhood of RT #1 [175327, 179651] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 175327-176232 bp Feature: gene Location: 176206-176493 bp Feature: gene Location: 176718-177257 bp Ori: OXV17110.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177048-177126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177048-17712 6 bp Feature: gene Location: 177285-177806 bp Ori: OXV17111.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177291-177573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1772 91-177573 bp Feature: domain Description: GIIM Note: maturase Location: 177621-177801 bp Feature: domain Description: GIIM Note: maturase Location: 17762 1-177801 bp Feature: gene Location: 178161-178349 bp Feature: gene Location: 178422-179651 bp Ori: OXV17183.1 Feature: domain Description: YesM Location: 178902-179643 bp Feature: domain Description: YesM Location: 178902 -179643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)